RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CPLX3Q8WVH0 158 aa20.05■□□□□ 0.8
POLR2J3-209ENST00000504157 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
POLR2J3-209ENST00000504157 MST1RQ04912 1400 aa20.05■□□□□ 0.8
POLR2J3-209ENST00000504157 C1orf167Q5SNV9 1468 aa20.05■□□□□ 0.8
POLR2J3-209ENST00000504157 ECM29Q5VYK3 1845 aa20.05■□□□□ 0.8
POLR2J3-209ENST00000504157 SH2B2O14492 632 aaPredicted RBP20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 ZNF213O14771 459 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 ACTN4O43707 911 aaKnown RBP20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 CIAO1O76071 339 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 RAB11FIP4Q86YS3 637 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 APPBP2Q92624 585 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 SERTAD1Q9UHV2 236 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 GGA2Q9UJY4 613 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 KLHL33A6NCF5 533 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 NTRK3Q16288 839 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 NOSTRINQ8IVI9 506 aa20.04■□□□□ 0.8
POLR2J3-209ENST00000504157 H7C1W4 665 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 POLR2DO15514 142 aaKnown RBP20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 CASP14P31944 242 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 NAP1L1P55209 391 aaKnown RBP20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 CKAP4Q07065 602 aaKnown RBP20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 FILIP1LQ4L180 1135 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 APOA5Q6Q788 366 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 A0A1B0GUA9 196 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 GYPCP04921 128 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 DRP2Q13474 957 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 CUL4BQ13620 913 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 ZNF827Q17R98 1081 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 PAPD7Q5XG87 772 aaKnown RBP20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 SAR1BQ9Y6B6 198 aa20.03■□□□□ 0.8
POLR2J3-209ENST00000504157 EYA2O00167 538 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 ERVK-24P63145 666 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 BIRC2Q13490 618 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 TTC19Q6DKK2 380 aaPredicted RBP20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 CCDC50Q8IVM0 306 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 GSPT2Q8IYD1 628 aaKnown RBP20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 CCDC13Q8IYE1 715 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 SLC52A2Q9HAB3 445 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 SLC24A3Q9HC58 644 aa20.02■□□□□ 0.8
POLR2J3-209ENST00000504157 BCL9LQ86UU0 1499 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 ZMYND10O75800 440 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 IARSP41252 1262 aaKnown RBP20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 SARNPP82979 210 aaKnown RBP20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 GRIK3Q13003 919 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 TRIM14Q14142 442 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 ZKSCAN8Q15776 578 aaPredicted RBP20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 SAMD1Q6SPF0 538 aaPredicted RBP20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 CYP26C1Q6V0L0 522 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 SLAIN2Q9P270 581 aa20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 DDX20Q9UHI6 824 aaKnown RBP20.02■□□□□ 0.79
POLR2J3-209ENST00000504157 FXR1P51114 621 aaKnown RBP eCLIP20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 INHBEP58166 350 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 RILPL1Q5EBL4 403 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 TLDC1Q6P9B6 456 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 PLBD2Q8NHP8 589 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 WASF1Q92558 559 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 TMEM87BQ96K49 555 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 EPN3Q9H201 632 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 SLC40A1Q9NP59 571 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 SRPRBQ9Y5M8 271 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 NID2Q14112 1375 aa20.01■□□□□ 0.79
POLR2J3-209ENST00000504157 TOB1P50616 345 aaPredicted RBP20■□□□□ 0.79
POLR2J3-209ENST00000504157 ATP2B2Q01814 1243 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 PDCLQ13371 301 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 WASHC4Q2M389 1173 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 SGMS1Q86VZ5 419 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 RUBCNQ92622 972 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 PARP4Q9UKK3 1724 aaKnown RBP20■□□□□ 0.79
POLR2J3-209ENST00000504157 RANBP6O60518 1105 aaKnown RBP20■□□□□ 0.79
POLR2J3-209ENST00000504157 CDR1P51861 262 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 TBC1D8BQ0IIM8 1120 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 SNCBQ16143 134 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 NAA35Q5VZE5 725 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 ALS2CLQ60I27 953 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 PHKBQ93100 1093 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 ABHD10Q9NUJ1 306 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 HDAC6Q9UBN7 1215 aa20■□□□□ 0.79
POLR2J3-209ENST00000504157 SNRPA1P09661 255 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 CLNS1AP54105 237 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 TTMPQ5BVD1 217 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 FOXP1Q9H334 677 aaPredicted RBP19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 LRRC10BA6NIK2 292 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 ZBTB43O43298 467 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 EZRP15311 586 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 SLC39A6Q13433 755 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 SPECC1Q5M775 1068 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 EMC10Q5UCC4 262 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 ATP6V0A4Q9HBG4 840 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 FAM217BQ9NTX9 383 aaPredicted RBP19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
POLR2J3-209ENST00000504157 ANKRD33BA6NCL7 494 aa19.98■□□□□ 0.79
POLR2J3-209ENST00000504157 FMNL1O95466 1100 aaPredicted RBP19.98■□□□□ 0.79
POLR2J3-209ENST00000504157 MMP1P03956 469 aa19.98■□□□□ 0.79
POLR2J3-209ENST00000504157 SND1Q7KZF4 910 aaKnown RBP eCLIP19.98■□□□□ 0.79
POLR2J3-209ENST00000504157 SH3RF1Q7Z6J0 888 aa19.98■□□□□ 0.79
POLR2J3-209ENST00000504157 PARP9Q8IXQ6 854 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms