RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 ETF1P62495 437 aaKnown RBP6.32□□□□□ -1.4
SMN2-204ENST00000503678 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 GNPTABQ3T906 1256 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 C12orf40Q86WS4 652 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 ZDHHC13Q8IUH4 622 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 SLFN12Q8IYM2 578 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 KLHL6Q8WZ60 621 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 ACSF2Q96CM8 615 aaPredicted RBP6.32□□□□□ -1.4
SMN2-204ENST00000503678 MFSD3Q96ES6 412 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
SMN2-204ENST00000503678 DHRS1Q96LJ7 313 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 WDR18Q9BV38 432 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 CARD10Q9BWT7 1032 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 USP26Q9BXU7 913 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 PCDHB10Q9UN67 800 aa6.32□□□□□ -1.4
SMN2-204ENST00000503678 CHURC1-FNTBB4DL54 471 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 TM4SF5O14894 197 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 AOC2O75106 756 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 HCLS1P14317 486 aaPredicted RBP6.31□□□□□ -1.4
SMN2-204ENST00000503678 TM4SF20Q53R12 229 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 MCATQ8IVS2 390 aaKnown RBP6.31□□□□□ -1.4
SMN2-204ENST00000503678 AGGF1Q8N302 714 aaeCLIP6.31□□□□□ -1.4
SMN2-204ENST00000503678 NINJ1Q92982 152 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 CSADQ9Y600 493 aa6.31□□□□□ -1.4
SMN2-204ENST00000503678 RFPL3O75679 317 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
SMN2-204ENST00000503678 NLRP12P59046 1061 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 ID3Q02535 119 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 ZBTB37Q5TC79 503 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 CCDC181Q5TID7 509 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 SLC6A19Q695T7 634 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 MRPL41Q8IXM3 137 aaKnown RBP6.3□□□□□ -1.4
SMN2-204ENST00000503678 NIM1KQ8IY84 436 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 FAM13CQ8NE31 585 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 TMEM87BQ96K49 555 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
SMN2-204ENST00000503678 RGS13O14921 159 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 DHX15O43143 795 aaKnown RBP6.29□□□□□ -1.4
SMN2-204ENST00000503678 S100BP04271 92 aaPredicted RBP6.29□□□□□ -1.4
SMN2-204ENST00000503678 CD68P34810 354 aaPredicted RBP6.29□□□□□ -1.4
SMN2-204ENST00000503678 NFIAQ12857 509 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 EXOSC6Q5RKV6 272 aaKnown RBP6.29□□□□□ -1.4
SMN2-204ENST00000503678 HID1Q8IV36 788 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 PHACTR4Q8IZ21 702 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 GALNT11Q8NCW6 608 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 ZNF507Q8TCN5 953 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 CHAC2Q8WUX2 184 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 STAG1Q8WVM7 1258 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 SMARCC1Q92922 1105 aaPredicted RBP6.29□□□□□ -1.4
SMN2-204ENST00000503678 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 RAD18Q9NS91 495 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 SUCOQ9UBS9 1254 aaKnown RBP6.29□□□□□ -1.4
SMN2-204ENST00000503678 TJP2Q9UDY2 1190 aa6.29□□□□□ -1.4
SMN2-204ENST00000503678 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 PRR19A6NJB7 356 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 ADAM11O75078 769 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 PARNO95453 639 aaKnown RBP6.28□□□□□ -1.4
SMN2-204ENST00000503678 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
SMN2-204ENST00000503678 PPM1JQ5JR12 505 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.28□□□□□ -1.4
SMN2-204ENST00000503678 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 KISS1RQ969F8 398 aaPredicted RBP6.28□□□□□ -1.4
SMN2-204ENST00000503678 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 UBL7Q96S82 380 aaPredicted RBP6.28□□□□□ -1.4
SMN2-204ENST00000503678 KIF2CQ99661 725 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 APBA2Q99767 749 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 CRIM1Q9NZV1 1036 aa6.28□□□□□ -1.4
SMN2-204ENST00000503678 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 PLD2O14939 933 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 TMPRSS2O15393 492 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 DLGAP3O95886 979 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 C8AP07357 584 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 MYCLP1P12525 358 aaPredicted RBP6.27□□□□□ -1.41
SMN2-204ENST00000503678 CNGA1P29973 690 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 STAT3P40763 770 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMN2-204ENST00000503678 HSP90AA2PQ14568 343 aaPredicted RBP6.27□□□□□ -1.41
SMN2-204ENST00000503678 DUOXA2Q1HG44 320 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 SV2CQ496J9 727 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.41
SMN2-204ENST00000503678 THNSL2Q86YJ6 484 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 RNF214Q8ND24 703 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 IPO9Q96P70 1041 aaKnown RBP6.27□□□□□ -1.41
SMN2-204ENST00000503678 DHRS4Q9BTZ2 278 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 RUSC1Q9BVN2 902 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 CHMP4AQ9BY43 222 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMN2-204ENST00000503678 ATXN3LQ9H3M9 355 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 CAAP1Q9H8G2 361 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
SMN2-204ENST00000503678 ATP8A1Q9Y2Q0 1164 aa6.27□□□□□ -1.41
SMN2-204ENST00000503678 TRAV20A0A0B4J274 112 aa6.26□□□□□ -1.41
SMN2-204ENST00000503678 DDX3YO15523 660 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms