RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TBC1D10CQ8IV04 446 aa21.6■■□□□ 1.05
PDLIM7-209ENST00000503346 RNF41Q9H4P4 317 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-209ENST00000503346 RPAP3Q9H6T3 665 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-209ENST00000503346 SYNPO2Q9UMS6 1093 aa21.6■■□□□ 1.05
PDLIM7-209ENST00000503346 MYH8P13535 1937 aa21.6■■□□□ 1.05
PDLIM7-209ENST00000503346 NT5C2P49902 561 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 HERVK_113P62684 666 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 KIF22Q14807 665 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 IMMTQ16891 758 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 FAM110CQ1W6H9 321 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 OTOP1Q7RTM1 612 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 GTF3C2Q8WUA4 911 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 MKL1Q969V6 931 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 EFCC1Q9HA90 598 aa21.59■■□□□ 1.05
PDLIM7-209ENST00000503346 RANBP6O60518 1105 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 TTLL1O95922 423 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 PTH1RQ03431 593 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 PPP4R3BQ5MIZ7 849 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 MFSD6Q6ZSS7 791 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 ANKRD13CQ8N6S4 541 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 GOPCQ9HD26 462 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 CLIP2Q9UDT6 1046 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 TRIM17Q9Y577 477 aa21.58■■□□□ 1.05
PDLIM7-209ENST00000503346 WDR46O15213 610 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 NOVP48745 357 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 RRP12Q5JTH9 1297 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 SPICE1Q8N0Z3 855 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 ESYT1Q9BSJ8 1104 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 ARHGAP39Q9C0H5 1083 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 IL17RBQ9NRM6 502 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 TOMM22Q9NS69 142 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 MORF4L1Q9UBU8 362 aa21.57■■□□□ 1.04
PDLIM7-209ENST00000503346 GNRH1P01148 92 aa21.56■■□□□ 1.04
PDLIM7-209ENST00000503346 CTGFP29279 349 aa21.56■■□□□ 1.04
PDLIM7-209ENST00000503346 LBX2Q6XYB7 198 aa21.56■■□□□ 1.04
PDLIM7-209ENST00000503346 MAP4K1Q92918 833 aa21.56■■□□□ 1.04
PDLIM7-209ENST00000503346 U3KPZ7 1027 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-209ENST00000503346 NEDD4P46934 1319 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 F5H6K3 240 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 CDC45O75419 566 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 PSMC4P43686 418 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 KLRC3Q07444 240 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 FBXO46Q6PJ61 603 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 POTEEQ6S8J3 1075 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 GMCL1P1Q8NEA9 526 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 TRIM47Q96LD4 638 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 TANGO6Q9C0B7 1094 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 TCP11L1Q9NUJ3 509 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 RBPJLQ9UBG7 517 aa21.55■■□□□ 1.04
PDLIM7-209ENST00000503346 NDUFB10O96000 172 aa21.54■■□□□ 1.04
PDLIM7-209ENST00000503346 FCGRTP55899 365 aa21.54■■□□□ 1.04
PDLIM7-209ENST00000503346 COG2Q14746 738 aa21.54■■□□□ 1.04
PDLIM7-209ENST00000503346 ESR2Q92731 530 aa21.54■■□□□ 1.04
PDLIM7-209ENST00000503346 TXNRD2Q9NNW7 524 aa21.54■■□□□ 1.04
PDLIM7-209ENST00000503346 HOXC10Q9NYD6 342 aa21.54■■□□□ 1.04
PDLIM7-209ENST00000503346 SPDYE16A6NNV3 312 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 NMT2O60551 498 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 FMNL1O95466 1100 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 CASC1Q6TDU7 716 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 KIAA1211Q6ZU35 1233 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 LRRC47Q8N1G4 583 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 GPRC5AQ8NFJ5 357 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 NKX2-3Q8TAU0 364 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 ABHD8Q96I13 439 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 LSG1Q9H089 658 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 STX8Q9UNK0 236 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 PTPN22Q9Y2R2 807 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 MYPNQ86TC9 1320 aa21.53■■□□□ 1.04
PDLIM7-209ENST00000503346 CYP21A2P08686 494 aa21.52■■□□□ 1.04
PDLIM7-209ENST00000503346 DSG3P32926 999 aa21.52■■□□□ 1.04
PDLIM7-209ENST00000503346 PRMT2P55345 433 aa21.52■■□□□ 1.04
PDLIM7-209ENST00000503346 CNNM2Q9H8M5 875 aa21.52■■□□□ 1.04
PDLIM7-209ENST00000503346 LAMA4Q16363 1823 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 RAD21O60216 631 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 CNMDO75829 334 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 FLOT1O75955 427 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 HOXD10P28358 340 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 ERVK-24P63145 666 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 FAM83BQ5T0W9 1011 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 PAGR1Q9BTK6 254 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 KRT23Q9C075 422 aa21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 RBM8AQ9Y5S9 174 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-209ENST00000503346 PEX10O60683 326 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 ECM2O94769 699 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 Q3C1V9 767 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 SLFN13Q68D06 897 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 MB21D1Q8N884 522 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 TTC14Q96N46 770 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 SRRDQ9UH36 339 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 HPS5Q9UPZ3 1129 aa21.5■■□□□ 1.03
PDLIM7-209ENST00000503346 B4E1Z4 1266 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 TNPO2O14787 897 aaKnown RBP21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 KDM4AO75164 1064 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 ATG4CQ96DT6 458 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 GMCL1Q96IK5 515 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 NUP88Q99567 741 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 ANO2Q9NQ90 1003 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 FBXO28Q9NVF7 368 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms