RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 LPAR1Q92633 364 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.12
SYNE4-206ENST00000503121 HOXC10Q9NYD6 342 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 MYH8P13535 1937 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 ROBO3Q96MS0 1386 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 HTTP42858 3142 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 UBXN2AP68543 259 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 PDE4BQ07343 736 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 PPARAQ07869 468 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
SYNE4-206ENST00000503121 COG2Q14746 738 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 KIAA1755Q5JYT7 1200 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNE4-206ENST00000503121 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 RABGAP1Q9Y3P9 1069 aa14.32□□□□□ -0.12
SYNE4-206ENST00000503121 CENPFP49454 3210 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 ELNP15502 786 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 SDSP20132 328 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 MAPK4P31152 587 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 CCNA1P78396 465 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 IRF5Q13568 498 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-206ENST00000503121 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 MGAMO43451 1857 aa14.31□□□□□ -0.12
SYNE4-206ENST00000503121 SPDYE16A6NNV3 312 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-206ENST00000503121 FLOT1O75955 427 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 EN2P19622 333 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-206ENST00000503121 MTFR1Q15390 333 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 PXYLP1Q8TE99 480 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 PORCNQ9H237 461 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 CLIP2Q9UDT6 1046 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 GJD2Q9UKL4 321 aa14.3□□□□□ -0.12
SYNE4-206ENST00000503121 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
SYNE4-206ENST00000503121 FOXP2O15409 715 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 CNMDO75829 334 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 CCL5P13501 91 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 CYP2B6P20813 491 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
SYNE4-206ENST00000503121 TFAP4Q01664 338 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 CTDSPL2Q05D32 466 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 FAM47AQ5JRC9 791 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 CWC27Q6UX04 472 aaKnown RBP14.29□□□□□ -0.12
SYNE4-206ENST00000503121 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 PLEKHH3Q7Z736 793 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 ZNF589Q86UQ0 364 aaPredicted RBP14.29□□□□□ -0.12
SYNE4-206ENST00000503121 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 RNF208Q9H0X6 261 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 BTBD7Q9P203 1132 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 NYAP2Q9P242 653 aa14.29□□□□□ -0.12
SYNE4-206ENST00000503121 HIP1O00291 1037 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 FGAP02671 866 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 INHAP05111 366 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
SYNE4-206ENST00000503121 PDE4AP27815 886 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 DSG3P32926 999 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 ALX1Q15699 326 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 GPR142Q7Z601 462 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 NEDD1Q8NHV4 660 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 SOCS4Q8WXH5 440 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 CEP95Q96GE4 821 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
SYNE4-206ENST00000503121 TSPY2A6NKD2 308 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 F5H6K3 240 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 RANBP6O60518 1105 aaKnown RBP14.27□□□□□ -0.13
SYNE4-206ENST00000503121 TTLL1O95922 423 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 KLRC3Q07444 240 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 PLS1Q14651 629 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 MB21D1Q8N884 522 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 UNC93B1Q9H1C4 597 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 INCENPQ9NQS7 918 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 ANAPC4Q9UJX5 808 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 IVNS1ABPQ9Y6Y0 642 aa14.27□□□□□ -0.13
SYNE4-206ENST00000503121 IGKV6D-41A0A0C4DH26 115 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 NDUFB10O96000 172 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 HMGCRP04035 888 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 GJB1P08034 283 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 MKL1Q969V6 931 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 NUP88Q99567 741 aaPredicted RBP14.26□□□□□ -0.13
SYNE4-206ENST00000503121 SPATC1LQ9H0A9 340 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
SYNE4-206ENST00000503121 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
SYNE4-206ENST00000503121 XRCC5P13010 732 aaKnown RBP14.25□□□□□ -0.13
SYNE4-206ENST00000503121 RGS2P41220 211 aa14.25□□□□□ -0.13
SYNE4-206ENST00000503121 HAND2P61296 217 aa14.25□□□□□ -0.13
SYNE4-206ENST00000503121 RRP12Q5JTH9 1297 aaKnown RBP14.25□□□□□ -0.13
SYNE4-206ENST00000503121 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
SYNE4-206ENST00000503121 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms