RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SHC4Q6S5L8 630 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 FLAD1Q8NFF5 587 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 OXER1Q8TDS5 423 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
USP46-204ENST00000503060 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 HPSEQ9Y251 543 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 CNTNAP5Q8WYK1 1306 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 PPFIA4O75335 1185 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 SRGNP10124 158 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 PLCG2P16885 1265 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 IQCB1Q15051 598 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 RESP18Q5W5W9 173 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 DGKHQ86XP1 1220 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 SLF2Q8IX21 1173 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
USP46-204ENST00000503060 ANKS1AQ92625 1134 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 TIGD1Q96MW7 591 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.29
USP46-204ENST00000503060 GAKO14976 1311 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 ZNF500O60304 480 aaPredicted RBP13.27□□□□□ -0.29
USP46-204ENST00000503060 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
USP46-204ENST00000503060 CLIC6Q96NY7 704 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 IL17RBQ9NRM6 502 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.29
USP46-204ENST00000503060 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.29
USP46-204ENST00000503060 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 PEX14O75381 377 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 KRT2P35908 639 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 SYKP43405 635 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 PLCD1P51178 756 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 CCDC178Q5BJE1 867 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
USP46-204ENST00000503060 COA1Q9GZY4 146 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 KAT14Q9H8E8 782 aa13.26□□□□□ -0.29
USP46-204ENST00000503060 A0A087WWV3 80 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 MMP10P09238 476 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 RHBDL3P58872 404 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 MCCD1P59942 119 aaPredicted RBP13.25□□□□□ -0.29
USP46-204ENST00000503060 GTF2IP78347 998 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 KIF5BP33176 963 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 PDE6BP35913 854 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 SETDB1Q15047 1291 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
USP46-204ENST00000503060 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 EP400Q96L91 3159 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 FLT1P17948 1338 aa13.25□□□□□ -0.29
USP46-204ENST00000503060 VGLL3A8MV65 326 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 TSPY3P0CV98 308 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 TSPY8P0CW00 308 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 RASA1P20936 1047 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 PNMA1Q8ND90 353 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 ZC3H15Q8WU90 426 aaKnown RBP13.24□□□□□ -0.29
USP46-204ENST00000503060 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
USP46-204ENST00000503060 DDX60LQ5H9U9 1706 aaKnown RBP13.24□□□□□ -0.29
USP46-204ENST00000503060 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 PTPREP23469 700 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 ZNF75DP51815 510 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 ZC3H12CQ9C0D7 883 aaKnown RBP13.24□□□□□ -0.29
USP46-204ENST00000503060 ZNF287Q9HBT7 754 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 CEP131Q9UPN4 1083 aa13.24□□□□□ -0.29
USP46-204ENST00000503060 COL11A2P13942 1736 aaPredicted RBP13.24□□□□□ -0.29
USP46-204ENST00000503060 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 SCG2P13521 617 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 GRM4Q14833 912 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 C16orf86Q6ZW13 317 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 DHX40Q8IX18 779 aaKnown RBP13.23□□□□□ -0.29
USP46-204ENST00000503060 MASTLQ96GX5 879 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 NAT10Q9H0A0 1025 aaKnown RBP13.23□□□□□ -0.29
USP46-204ENST00000503060 DAGLAQ9Y4D2 1042 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 BECN2A8MW95 431 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 ATP2B1P20020 1258 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 CDK8P49336 464 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
USP46-204ENST00000503060 NPY5RQ15761 445 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 PFKFB3Q16875 520 aaPredicted RBP13.23□□□□□ -0.29
USP46-204ENST00000503060 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
USP46-204ENST00000503060 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 KCNH3Q9ULD8 1083 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
USP46-204ENST00000503060 MORC2Q9Y6X9 1032 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms