RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 DLGAP5Q15398 846 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 USP17L2Q6R6M4 530 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 SAMD7Q7Z3H4 446 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 GAS2L3Q86XJ1 694 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 ZBED3Q96IU2 234 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-202ENST00000502818 PGBD1Q96JS3 809 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 TMEM39BQ9GZU3 492 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 PDCL3Q9H2J4 239 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 KAT14Q9H8E8 782 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 VPS54Q9P1Q0 977 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 GJA3Q9Y6H8 435 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 PSME4Q14997 1843 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 GOLGA6L22H0YM25 854 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 WNT10BO00744 389 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 DDAH1O94760 285 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 YBX3P16989 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
CPNE4-202ENST00000502818 GMPSP49915 693 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-202ENST00000502818 NR5A1Q13285 461 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 KLHL40Q2TBA0 621 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 EARS2Q5JPH6 523 aaKnown RBP8.48□□□□□ -1.05
CPNE4-202ENST00000502818 ARHGAP27Q6ZUM4 889 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 SIAH1Q8IUQ4 282 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 TMEM87AQ8NBN3 555 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 LEO1Q8WVC0 666 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-202ENST00000502818 JDP2Q8WYK2 163 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 VEZTQ9HBM0 779 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 MTMR4Q9NYA4 1195 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 CLIC4Q9Y696 253 aa8.48□□□□□ -1.05
CPNE4-202ENST00000502818 FRMPD2Q68DX3 1309 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-202ENST00000502818 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 MPHOSPH10O00566 681 aaKnown RBP8.47□□□□□ -1.05
CPNE4-202ENST00000502818 NOVP48745 357 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 GRM4Q14833 912 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 NPY5RQ15761 445 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 TBC1D10BQ4KMP7 808 aaPredicted RBP8.47□□□□□ -1.05
CPNE4-202ENST00000502818 AGBL3Q8NEM8 1001 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 VPS33BQ9H267 617 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 CLIP2Q9UDT6 1046 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 PGAP2Q9UHJ9 254 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 ESPNB1AK53 854 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 FZD9O00144 591 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 WNT7AO00755 349 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 CDKL5O76039 1030 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 RCAN1P53805 252 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 SEPT2Q15019 361 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 TYW1BQ6NUM6 668 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 DLK2Q6UY11 383 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 MIGA2Q7L4E1 593 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 CCDC84Q86UT8 332 aaPredicted RBP8.47□□□□□ -1.05
CPNE4-202ENST00000502818 MICALL2Q8IY33 904 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 GPKOWQ92917 476 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CPNE4-202ENST00000502818 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 SYT17Q9BSW7 474 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 PANK2Q9BZ23 570 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 MYOZ2Q9NPC6 264 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 PI4KBQ9UBF8 816 aa8.47□□□□□ -1.05
CPNE4-202ENST00000502818 MYO3BQ8WXR4 1341 aa8.46□□□□□ -1.05
CPNE4-202ENST00000502818 STK36Q9NRP7 1315 aa8.46□□□□□ -1.05
CPNE4-202ENST00000502818 PRPF3O43395 683 aaKnown RBP8.46□□□□□ -1.06
CPNE4-202ENST00000502818 LIG1P18858 919 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 KRT85P78386 507 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 ATP2B2Q01814 1243 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 PRAMEF18Q5VWM3 479 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 TTBK2Q6IQ55 1244 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 CPLX2Q6PUV4 134 aaKnown RBP8.46□□□□□ -1.06
CPNE4-202ENST00000502818 OGFOD1Q8N543 542 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.06
CPNE4-202ENST00000502818 EHD4Q9H223 541 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 ZSCAN16Q9H4T2 348 aaPredicted RBP8.46□□□□□ -1.06
CPNE4-202ENST00000502818 FZD1Q9UP38 647 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 LTBP3Q9NS15 1303 aa8.46□□□□□ -1.06
CPNE4-202ENST00000502818 PALM3A6NDB9 673 aaPredicted RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 ENTPD3O75355 529 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 DEXIO95424 95 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 MMP1P03956 469 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 TOB1P50616 345 aaPredicted RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 CERKLQ49MI3 558 aaPredicted RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 TATDN1Q6P1N9 297 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 TRPM4Q8TD43 1214 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 SPATA32Q96LK8 384 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 RNF26Q9BY78 433 aaPredicted RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 VAT1LQ9HCJ6 419 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 RBM28Q9NW13 759 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 CNOT7Q9UIV1 285 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 ATP6V1DQ9Y5K8 247 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 ATRNL1Q5VV63 1379 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 PLIN4Q96Q06 1357 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 CCDC196A0A1B0GTZ2 297 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 KLRF2D3W0D1 207 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 GH2P01242 217 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 CALM1P0DP23 149 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 CALM2P0DP24 149 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 CALM3P0DP25 149 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 PDHBP11177 359 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms