RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 TTC6Q86TZ1 520 aa12.86□□□□□ -0.35
CDK11A-222ENST00000498810 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
CDK11A-222ENST00000498810 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
CDK11A-222ENST00000498810 HAUS7Q99871 368 aa12.86□□□□□ -0.35
CDK11A-222ENST00000498810 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
CDK11A-222ENST00000498810 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
CDK11A-222ENST00000498810 ERC2O15083 957 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 GDF11O95390 407 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 ASNSP08243 561 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 CFHP08603 1231 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 CCDC84Q86UT8 332 aaPredicted RBP12.85□□□□□ -0.35
CDK11A-222ENST00000498810 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 EFCC1Q9HA90 598 aa12.85□□□□□ -0.35
CDK11A-222ENST00000498810 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.85□□□□□ -0.35
CDK11A-222ENST00000498810 USP17L5A8MUK1 530 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 TLR2O60603 784 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 MBD4O95243 580 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 CAP2P40123 477 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
CDK11A-222ENST00000498810 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 FBXO46Q6PJ61 603 aaPredicted RBP12.84□□□□□ -0.35
CDK11A-222ENST00000498810 BLOC1S3Q6QNY0 202 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 FOXP4Q8IVH2 680 aaPredicted RBP12.84□□□□□ -0.35
CDK11A-222ENST00000498810 PHOX2BQ99453 314 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 FEZ1Q99689 392 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 MCM9Q9NXL9 1143 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 PCDHB15Q9Y5E8 787 aa12.84□□□□□ -0.35
CDK11A-222ENST00000498810 A0A0G2JLL6 359 aaPredicted RBP12.83□□□□□ -0.36
CDK11A-222ENST00000498810 ADD2P35612 726 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 MAP3K10Q02779 954 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK11A-222ENST00000498810 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 PRRT2Q7Z6L0 340 aaPredicted RBP12.83□□□□□ -0.36
CDK11A-222ENST00000498810 LCORLQ8N3X6 602 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 ARMT1Q9H993 441 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 CABP5Q9NP86 173 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 TMOD4Q9NZQ9 345 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
CDK11A-222ENST00000498810 CPA4Q9UI42 421 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 AFG3L2Q9Y4W6 797 aa12.83□□□□□ -0.36
CDK11A-222ENST00000498810 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
CDK11A-222ENST00000498810 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
CDK11A-222ENST00000498810 HMGCS2P54868 508 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 SOX10P56693 466 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 SPP2Q13103 211 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 AAMPQ13685 434 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 SDR42E1Q8WUS8 393 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 RIOK1Q9BRS2 568 aaKnown RBP12.82□□□□□ -0.36
CDK11A-222ENST00000498810 FSD1Q9BTV5 496 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 ZBTB21Q9ULJ3 1066 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
CDK11A-222ENST00000498810 CYP2C8P10632 490 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 MX1P20591 662 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 IRX3P78415 501 aaPredicted RBP12.81□□□□□ -0.36
CDK11A-222ENST00000498810 MTMR2Q13614 643 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 CERKLQ49MI3 558 aaPredicted RBP12.81□□□□□ -0.36
CDK11A-222ENST00000498810 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
CDK11A-222ENST00000498810 EHD4Q9H223 541 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
CDK11A-222ENST00000498810 GINM1Q9NU53 330 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 AGTPBP1Q9UPW5 1226 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
CDK11A-222ENST00000498810 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
CDK11A-222ENST00000498810 GLRX3O76003 335 aaKnown RBP12.8□□□□□ -0.36
CDK11A-222ENST00000498810 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
CDK11A-222ENST00000498810 GH2P01242 217 aa12.8□□□□□ -0.36
CDK11A-222ENST00000498810 LACTBP83111 547 aaPredicted RBP12.8□□□□□ -0.36
CDK11A-222ENST00000498810 UBE3CQ15386 1083 aa12.8□□□□□ -0.36
CDK11A-222ENST00000498810 ZYXQ15942 572 aaKnown RBP12.8□□□□□ -0.36
CDK11A-222ENST00000498810 ABCB5Q2M3G0 1257 aa12.8□□□□□ -0.36
CDK11A-222ENST00000498810 KBTBD3Q8NAB2 608 aa12.8□□□□□ -0.36
CDK11A-222ENST00000498810 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
CDK11A-222ENST00000498810 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
CDK11A-222ENST00000498810 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
CDK11A-222ENST00000498810 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
CDK11A-222ENST00000498810 HOXD10P28358 340 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 FCGRTP55899 365 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 SLC9C1Q4G0N8 1177 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 DCP1AQ9NPI6 582 aaPredicted RBP12.79□□□□□ -0.36
CDK11A-222ENST00000498810 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 SLC45A1Q9Y2W3 748 aa12.79□□□□□ -0.36
CDK11A-222ENST00000498810 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
CDK11A-222ENST00000498810 GNRH1P01148 92 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 APPP05067 770 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 PSMC4P43686 418 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 HDAC1Q13547 482 aaPredicted RBP12.78□□□□□ -0.36
CDK11A-222ENST00000498810 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
CDK11A-222ENST00000498810 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 TREML2Q5T2D2 321 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms