RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 CLRN2A0PK11 232 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 TCP10L2B9ZVM9 353 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 KLRF2D3W0D1 207 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 PLEKHA8P1O95397 391 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 SCG2P13521 617 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 GUCY1B3Q02153 619 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 GSE1Q14687 1217 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 PFKFB3Q16875 520 aaPredicted RBP9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 MYSM1Q5VVJ2 828 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 MICALL2Q8IY33 904 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 SRBD1Q8N5C6 995 aaKnown RBP9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 JMYQ8N9B5 988 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 CCDC148Q8NFR7 591 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 KCNG4Q8TDN1 519 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 SH2D4AQ9H788 454 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 RTEL1Q9NZ71 1219 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 CLIP2Q9UDT6 1046 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 MAD2L2Q9UI95 211 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 CNOT7Q9UIV1 285 aaKnown RBP9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 RCOR1Q9UKL0 485 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 PCDHAC2Q9Y5I4 1007 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 CNTNAP5Q8WYK1 1306 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 ECM29Q5VYK3 1845 aa9.75□□□□□ -0.85
SPIRE1-211ENST00000498803 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 LETM1O95202 739 aaPredicted RBP9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 YEATS4O95619 227 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 SNHG28P0DPA3 235 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 FOSBP53539 338 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 MAP3K10Q02779 954 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 ICA1Q05084 483 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 KIF4BQ2VIQ3 1234 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 RILPL1Q5EBL4 403 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 APOBEC3FQ8IUX4 373 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 NOSTRINQ8IVI9 506 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 DIS3L2Q8IYB7 885 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 DCAF4Q8WV16 495 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 LEO1Q8WVC0 666 aaPredicted RBP9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 RRP36Q96EU6 259 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 SEC63Q9UGP8 760 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 PPP2R3BQ9Y5P8 575 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 CNTNAP1P78357 1384 aa9.74□□□□□ -0.85
SPIRE1-211ENST00000498803 DTNBO60941 627 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 BMP15O95972 392 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 PDHBP11177 359 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 KRT2P35908 639 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 ATP2B2Q01814 1243 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 TRAF1Q13077 416 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 SF3A1Q15459 793 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 PKN1Q16512 942 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 DCAF15Q66K64 600 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 OTUD7BQ6GQQ9 843 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 GMCL1P1Q8NEA9 526 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 PHF20Q9BVI0 1012 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 DNAJC18Q9H819 358 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 GPRC5DQ9NZD1 345 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 CEP131Q9UPN4 1083 aa9.73□□□□□ -0.85
SPIRE1-211ENST00000498803 ASNSP08243 561 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 EEF2P13639 858 aaKnown RBP9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 LMOD1P29536 600 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 GNA11P29992 359 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 GUCY1A2P33402 732 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 TRAPPC10P48553 1259 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 NASPP49321 788 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 NLRP5P59047 1200 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 ZNF543Q08ER8 600 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 RASA3Q14644 834 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 STK38Q15208 465 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 DPY19L2Q6NUT2 758 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 TEX2Q8IWB9 1127 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 CMTR1Q8N1G2 835 aaKnown RBP9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 STAG2Q8N3U4 1231 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 BICD2Q8TD16 824 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 GMCL1Q96IK5 515 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 AIFM3Q96NN9 605 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 USP28Q96RU2 1077 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 GLT8D2Q9H1C3 349 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 RIOX1Q9H6W3 641 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 BARHL2Q9NY43 387 aa9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 MORC2Q9Y6X9 1032 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
SPIRE1-211ENST00000498803 ADAMTSL1Q8N6G6 1762 aa9.71□□□□□ -0.85
SPIRE1-211ENST00000498803 ESYT2A0FGR8 921 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 USP17L5A8MUK1 530 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 BTBD18B2RXH4 712 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 SPTLC2O15270 562 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 GRIN3BO60391 1043 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 GH2P01242 217 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 SLC1A4P43007 532 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 PRELPP51888 382 aa9.71□□□□□ -0.86
SPIRE1-211ENST00000498803 SEPT2Q15019 361 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms