RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 ZSWIM4Q9H7M6 989 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 MRPL44Q9H9J2 332 aaKnown RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 EFCC1Q9HA90 598 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 ZCCHC17Q9NP64 241 aaKnown RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 INTS13Q9NVM9 706 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 VPS18Q9P253 973 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 PUF60Q9UHX1 559 aaKnown RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 CDC23Q9UJX2 597 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 CCNL1Q9UK58 526 aaPredicted RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 ANGEL1Q9UNK9 670 aaKnown RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 AKAP2Q9Y2D5 859 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 RRP15Q9Y3B9 282 aaKnown RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 NFE2L3Q9Y4A8 694 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 WNK3Q9BYP7 1800 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 RGPD3A6NKT7 1758 aaPredicted RBP5.06□□□□□ -1.6
TNC-208ENST00000498724 RGPD4Q7Z3J3 1758 aa5.06□□□□□ -1.6
TNC-208ENST00000498724 ABCC12Q96J65 1359 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 SYNRGQ9UMZ2 1314 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 BTAF1O14981 1849 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CTAGE15A4D2H0 777 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CTAGE9A4FU28 777 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 SOWAHDA6NJG2 315 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 TK2O00142 265 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MYO1CO00159 1063 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MAP2K7O14733 419 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 GPAA1O43292 621 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 FGAP02671 866 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CTAGE8P0CG41 777 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 ZNF18P17022 549 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 ERCC5P28715 1186 aaPredicted RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 ADORA1P30542 326 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 USP5P45974 858 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CABP4P57796 275 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 FMR1Q06787 632 aaKnown RBP eCLIP5.05□□□□□ -1.6
TNC-208ENST00000498724 SSRP1Q08945 709 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 MORC3Q14149 939 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MCM6Q14566 821 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 WHAMMP3Q1A5X7 153 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 FILIP1LQ4L180 1135 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 LRRC24Q50LG9 513 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 HSP90AB3PQ58FF7 597 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 HSP90AA4PQ58FG1 418 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 TAF7LQ5H9L4 462 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 TMEM67Q5HYA8 995 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CT47A1Q5JQC4 288 aaPredicted RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 ZNF569Q5MCW4 686 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MSL1Q68DK7 614 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CTR9Q6PD62 1173 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 APOA5Q6Q788 366 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 SRLQ86TD4 932 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CTAGE6Q86UF2 777 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MICU3Q86XE3 530 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 TBC1D10CQ8IV04 446 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CTAGE4Q8IX94 777 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 C10orf67Q8IYJ2 551 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 TRMT44Q8IYL2 757 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 IFNL2Q8IZJ0 200 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MSL3Q8N5Y2 521 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 IGSF22Q8N9C0 903 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 NFATC2IPQ8NCF5 419 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 FAM71BQ8TC56 605 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 HNRNPLLQ8WVV9 542 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 MARVELD3Q96A59 401 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 ZNF594Q96JF6 807 aaPredicted RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 TMEM87BQ96K49 555 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 NAPGQ99747 312 aaPredicted RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 SLC26A6Q9BXS9 759 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 PDE11AQ9HCR9 933 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 LZTFL1Q9NQ48 299 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 ATG3Q9NT62 314 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 MKRN1Q9UHC7 482 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 RSPH14Q9UHP6 348 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 SERTAD1Q9UHV2 236 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 ADAM21Q9UKJ8 722 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 RAB21Q9UL25 225 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 TTF2Q9UNY4 1162 aaKnown RBP5.05□□□□□ -1.6
TNC-208ENST00000498724 CEP131Q9UPN4 1083 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 LAMB4A4D0S4 1761 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 SCN11AQ9UI33 1791 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 UTRNP46939 3433 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 CHD4Q14839 1912 aa5.05□□□□□ -1.6
TNC-208ENST00000498724 DDX60Q8IY21 1712 aaKnown RBP5.04□□□□□ -1.6
TNC-208ENST00000498724 A0A1B0GTH6 734 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 FOXN1O15353 648 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 FOXP2O15409 715 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 GRIN3BO60391 1043 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 MFAP3LO75121 409 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 RPS6KA5O75582 802 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 FMNL1O95466 1100 aaPredicted RBP5.04□□□□□ -1.6
TNC-208ENST00000498724 APPP05067 770 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 RHOXF2BP0C7M4 288 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 RXRAP19793 462 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 BMP6P22004 513 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 MCM3P25205 808 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 CDC27P30260 824 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 ZAP70P43403 619 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 SARSP49591 514 aaKnown RBP5.04□□□□□ -1.6
TNC-208ENST00000498724 GYS2P54840 703 aa5.04□□□□□ -1.6
TNC-208ENST00000498724 MDM2Q00987 491 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms