RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 USP5P45974 858 aa14.63□□□□□ -0.07
THBS3-209ENST00000498500 SMAD3P84022 425 aaKnown RBP14.63□□□□□ -0.07
THBS3-209ENST00000498500 CERKLQ49MI3 558 aaPredicted RBP14.63□□□□□ -0.07
THBS3-209ENST00000498500 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
THBS3-209ENST00000498500 SYMPKQ92797 1274 aaKnown RBP14.63□□□□□ -0.07
THBS3-209ENST00000498500 EAF2Q96CJ1 260 aaPredicted RBP14.63□□□□□ -0.07
THBS3-209ENST00000498500 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
THBS3-209ENST00000498500 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
THBS3-209ENST00000498500 SERPINB13Q9UIV8 391 aa14.63□□□□□ -0.07
THBS3-209ENST00000498500 SPDYE16A6NNV3 312 aaPredicted RBP14.62□□□□□ -0.07
THBS3-209ENST00000498500 CYP7A1P22680 504 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 ABCB5Q2M3G0 1257 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 TRIM60Q495X7 471 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 TATDN1Q6P1N9 297 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 ACER1Q8TDN7 264 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 CDH23Q9H251 3354 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 TTYH1Q9H313 450 aaPredicted RBP14.62□□□□□ -0.07
THBS3-209ENST00000498500 RPAP3Q9H6T3 665 aaPredicted RBP14.62□□□□□ -0.07
THBS3-209ENST00000498500 ZNF236Q9UL36 1845 aa14.62□□□□□ -0.07
THBS3-209ENST00000498500 SEPT4O43236 478 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 STRNO43815 780 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 ADORA2AP29274 412 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 ADCYAP1R1P41586 468 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 ZAP70P43403 619 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 OLFML2BQ68BL8 750 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 ERC1Q8IUD2 1116 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 MIGA1Q8NAN2 632 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 RHPN1Q8TCX5 695 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
THBS3-209ENST00000498500 CHMP4BQ9H444 224 aaKnown RBP14.61□□□□□ -0.07
THBS3-209ENST00000498500 PIH1D3Q9NQM4 214 aaKnown RBP14.61□□□□□ -0.07
THBS3-209ENST00000498500 PDLIM7Q9NR12 457 aa14.61□□□□□ -0.07
THBS3-209ENST00000498500 MYH8P13535 1937 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 IGSF3O75054 1194 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 HMMRO75330 724 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 SH3RF1Q7Z6J0 888 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 TTC6Q86TZ1 520 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
THBS3-209ENST00000498500 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
THBS3-209ENST00000498500 EHD4Q9H223 541 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
THBS3-209ENST00000498500 SPTBN5Q9NRC6 3674 aaKnown RBP14.6□□□□□ -0.07
THBS3-209ENST00000498500 MYH7P12883 1935 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 IDH1O75874 414 aaKnown RBP14.59□□□□□ -0.07
THBS3-209ENST00000498500 IGHA2P01877 340 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 COG2Q14746 738 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 SNX17Q15036 470 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 LRRC41Q15345 812 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 HSP90AB4PQ58FF6 505 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 PRAMEF19Q5SWL8 479 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 AACSQ86V21 672 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 CERS3Q8IU89 383 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
THBS3-209ENST00000498500 RNPC3Q96LT9 517 aaKnown RBP14.59□□□□□ -0.07
THBS3-209ENST00000498500 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 HOXC10Q9NYD6 342 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 PLXNA1Q9UIW2 1896 aa14.59□□□□□ -0.07
THBS3-209ENST00000498500 COBLO75128 1261 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 ERCC3P19447 782 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 TLE2Q04725 743 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 PLS1Q14651 629 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 MAGEB6Q8N7X4 407 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 TANGO6Q9C0B7 1094 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 SPATC1LQ9H0A9 340 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 TACC3Q9Y6A5 838 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 NAV1Q8NEY1 1877 aa14.58□□□□□ -0.08
THBS3-209ENST00000498500 COL11A1P12107 1806 aaPredicted RBP14.57□□□□□ -0.08
THBS3-209ENST00000498500 TMEM265A0A087WTH1 108 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 MPHOSPH10O00566 681 aaKnown RBP14.57□□□□□ -0.08
THBS3-209ENST00000498500 SHMT1P34896 483 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 SEPT2Q15019 361 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 FAM47AQ5JRC9 791 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 C1orf53Q5VUE5 145 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 NCAPG2Q86XI2 1143 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 SHCBP1Q8NEM2 672 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 A0A0G2JMZ2 1700 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 MYO9BQ13459 2157 aa14.57□□□□□ -0.08
THBS3-209ENST00000498500 APBB1O00213 710 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
THBS3-209ENST00000498500 CLTBP09497 229 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 RAG1P15918 1043 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 GUCY1A2P33402 732 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 PLCD1P51178 756 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 MROH8Q9H579 483 aa14.56□□□□□ -0.08
THBS3-209ENST00000498500 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 RARBP10826 455 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 ITGB8P26012 769 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 TJAP1Q5JTD0 557 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
THBS3-209ENST00000498500 MB21D1Q8N884 522 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 MAML3Q96JK9 1138 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 XPNPEP3Q9NQH7 507 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 PHF24Q9UPV7 400 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 PCDHB15Q9Y5E8 787 aa14.55□□□□□ -0.08
THBS3-209ENST00000498500 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms