RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	WDR18	Q9BV38	432 aa		13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	KAT14	Q9H8E8	782 aa		13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	GOPC	Q9HD26	462 aa		13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	IL17RB	Q9NRM6	502 aa		13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	TMOD4	Q9NZQ9	345 aa		13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	NYAP2	Q9P242	653 aa		13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.44	□□□□□ -0.26
CTTN-208	ENST00000498223	IGKV6D-41	A0A0C4DH26	115 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	CCDC69	A6NI79	296 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	C19orf81	C9J6K1	198 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	ZBTB48	P10074	688 aa	Predicted RBP	13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	TOP1	P11387	765 aa	Known RBP	13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	RPS6KB1	P23443	525 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	RBM25	P49756	843 aa	Known RBP	13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	USP14	P54578	494 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	ANTXR2	P58335	489 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	SNAPC2	Q13487	334 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	LRRC47	Q8N1G4	583 aa	Known RBP	13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	TTC14	Q96N46	770 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	TBC1D32	Q96NH3	1257 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	TM6SF1	Q9BZW5	370 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	ZSWIM6	Q9HCJ5	1215 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	PDRG1	Q9NUG6	133 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	AFG3L2	Q9Y4W6	797 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	LOC285556	D6RIA3	1793 aa		13.43	□□□□□ -0.26
CTTN-208	ENST00000498223	CXCL11	O14625	94 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	GJA5	P36382	358 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	NEK4	P51957	841 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	GTF2A2	P52657	109 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	HMGCS2	P54868	508 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	USP17L2	Q6R6M4	530 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	SYNE3	Q6ZMZ3	975 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223		Q6ZUG5	572 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	DGKH	Q86XP1	1220 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	ENAH	Q8N8S7	591 aa	Predicted RBP	13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	TMEM47	Q9BQJ4	181 aa		13.42	□□□□□ -0.26
CTTN-208	ENST00000498223	WDR19	Q8NEZ3	1342 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223		A0A1W2PRG0	241 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	CETP	P11597	493 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	BACE1	P56817	501 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	EXOSC10	Q01780	885 aa	Known RBP	13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	COL9A3	Q14050	684 aa	Predicted RBP	13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	FASTKD5	Q7L8L6	764 aa	Known RBP	13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	CATIP	Q7Z7H3	387 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	SIAH1	Q8IUQ4	282 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	TMTC2	Q8N394	836 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	IGDCC4	Q8TDY8	1250 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	MTA3	Q9BTC8	594 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	MCOLN1	Q9GZU1	580 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	KIAA1683	Q9H0B3	1180 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	GPHN	Q9NQX3	736 aa	Predicted RBP	13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	RNF186	Q9NXI6	227 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	KCNH4	Q9UQ05	1017 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	TMX2	Q9Y320	296 aa		13.41	□□□□□ -0.26
CTTN-208	ENST00000498223	CCL15-CCL14	A0A0B4J2E2	113 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	MANSC4	A6NHS7	340 aa	Predicted RBP	13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	SH2B2	O14492	632 aa	Predicted RBP	13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	TRPA1	O75762	1119 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	RABEP1	Q15276	862 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	SEC23A	Q15436	765 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	CCL15	Q16663	113 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	CCDC96	Q2M329	555 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	SLFN13	Q68D06	897 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	RCSD1	Q6JBY9	416 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	NOL8	Q76FK4	1167 aa	Known RBP	13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	SPICE1	Q8N0Z3	855 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	PNMA1	Q8ND90	353 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	NUP133	Q8WUM0	1156 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	MKL1	Q969V6	931 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	VCPKMT	Q9H867	229 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	LY9	Q9HBG7	655 aa		13.4	□□□□□ -0.26
CTTN-208	ENST00000498223	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	COL11A1	P12107	1806 aa	Predicted RBP	13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	PARP14	Q460N5	1801 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223		A0A0G2JLL6	359 aa	Predicted RBP	13.39	□□□□□ -0.27
CTTN-208	ENST00000498223		F5H6K3	240 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	KLRC3	Q07444	240 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	IK	Q13123	557 aa	Predicted RBP	13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	DGKZ	Q13574	1117 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	ANKS1A	Q92625	1134 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	BRF1	Q92994	677 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	SENP2	Q9HC62	589 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	EMILIN3	Q9NT22	766 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	SLC12A7	Q9Y666	1083 aa		13.39	□□□□□ -0.27
CTTN-208	ENST00000498223	KLF18	A0A0U1RQI7	1052 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	CCDC85C	A6NKD9	419 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	ST18	O60284	1047 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	NDUFB10	O96000	172 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	LIFR	P42702	1097 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	SLC1A4	P43007	532 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	APOBR	Q0VD83	1088 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	SREBF2	Q12772	1141 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	ANKRD1	Q15327	319 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	SH3D19	Q5HYK7	790 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	OTUD7B	Q6GQQ9	843 aa		13.38	□□□□□ -0.27
CTTN-208	ENST00000498223	ZNF654	Q8IZM8	581 aa		13.38	□□□□□ -0.27

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