RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 OGDHLQ9ULD0 1010 aa27.18■■□□□ 1.94
CDKN2A-208ENST00000498124 PCDHB15Q9Y5E8 787 aa27.18■■□□□ 1.94
CDKN2A-208ENST00000498124 NR2E3Q9Y5X4 410 aa27.18■■□□□ 1.94
CDKN2A-208ENST00000498124 LAMA3Q16787 3333 aa27.17■■□□□ 1.94
CDKN2A-208ENST00000498124 CCNA1P78396 465 aa27.17■■□□□ 1.94
CDKN2A-208ENST00000498124 NECAB2Q7Z6G3 386 aa27.17■■□□□ 1.94
CDKN2A-208ENST00000498124 CCAR1Q8IX12 1150 aaKnown RBP27.17■■□□□ 1.94
CDKN2A-208ENST00000498124 TRMT44Q8IYL2 757 aaKnown RBP27.17■■□□□ 1.94
CDKN2A-208ENST00000498124 PUS7LQ9H0K6 701 aaKnown RBP27.17■■□□□ 1.94
CDKN2A-208ENST00000498124 PARP14Q460N5 1801 aa27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 IRX6P78412 446 aaPredicted RBP27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 MAP2K5Q13163 448 aa27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 DCTPP1Q9H773 170 aa27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 ECHDC1Q9NTX5 307 aa27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 FRMPD3Q5JV73 1810 aa27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 ZNF236Q9UL36 1845 aa27.16■■□□□ 1.94
CDKN2A-208ENST00000498124 USP17L12C9JPN9 530 aa27.15■■□□□ 1.94
CDKN2A-208ENST00000498124 USP17L21D6R901 530 aa27.15■■□□□ 1.94
CDKN2A-208ENST00000498124 EVI5O60447 810 aa27.15■■□□□ 1.94
CDKN2A-208ENST00000498124 PTPREP23469 700 aa27.15■■□□□ 1.94
CDKN2A-208ENST00000498124 CCND3P30281 292 aaPredicted RBP27.15■■□□□ 1.94
CDKN2A-208ENST00000498124 FLRT1Q9NZU1 646 aa27.15■■□□□ 1.94
CDKN2A-208ENST00000498124 CDK8P49336 464 aa27.14■■□□□ 1.94
CDKN2A-208ENST00000498124 GRB14Q14449 540 aa27.14■■□□□ 1.94
CDKN2A-208ENST00000498124 C16orf86Q6ZW13 317 aa27.14■■□□□ 1.94
CDKN2A-208ENST00000498124 SLC4A4Q9Y6R1 1079 aa27.14■■□□□ 1.94
CDKN2A-208ENST00000498124 GREB1LQ9C091 1923 aaPredicted RBP27.14■■□□□ 1.93
CDKN2A-208ENST00000498124 SLC15A5A6NIM6 579 aa27.13■■□□□ 1.93
CDKN2A-208ENST00000498124 ICA1Q05084 483 aa27.13■■□□□ 1.93
CDKN2A-208ENST00000498124 TSHZ3Q63HK5 1081 aa27.13■■□□□ 1.93
CDKN2A-208ENST00000498124 LHX8Q68G74 356 aa27.13■■□□□ 1.93
CDKN2A-208ENST00000498124 NBPF3Q9H094 633 aa27.13■■□□□ 1.93
CDKN2A-208ENST00000498124 TMX2Q9Y320 296 aa27.13■■□□□ 1.93
CDKN2A-208ENST00000498124 HOXC6P09630 235 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 COG2Q14746 738 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 WDR78Q5VTH9 848 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 CTR9Q6PD62 1173 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 TANGO6Q9C0B7 1094 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 CWC22Q9HCG8 908 aaKnown RBP27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 DNAH12Q6ZR08 3092 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 PFASO15067 1338 aa27.12■■□□□ 1.93
CDKN2A-208ENST00000498124 GLRX3O76003 335 aaKnown RBP27.11■■□□□ 1.93
CDKN2A-208ENST00000498124 IGHA2P01877 340 aa27.11■■□□□ 1.93
CDKN2A-208ENST00000498124 ZSCAN25Q6NSZ9 544 aa27.11■■□□□ 1.93
CDKN2A-208ENST00000498124 LPAR1Q92633 364 aa27.11■■□□□ 1.93
CDKN2A-208ENST00000498124 CCDC17Q96LX7 622 aa27.11■■□□□ 1.93
CDKN2A-208ENST00000498124 MOV10L1Q9BXT6 1211 aaKnown RBP27.11■■□□□ 1.93
CDKN2A-208ENST00000498124 SPICE1Q8N0Z3 855 aa27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 KBTBD3Q8NAB2 608 aa27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 NPLOC4Q8TAT6 608 aa27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 STRBPQ96SI9 672 aaKnown RBP27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 C11orf49Q9H6J7 331 aa27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 VCPKMTQ9H867 229 aa27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 ARHGEF10LQ9HCE6 1279 aa27.1■■□□□ 1.93
CDKN2A-208ENST00000498124 COL6A1P12109 1028 aa27.09■■□□□ 1.93
CDKN2A-208ENST00000498124 SPATC1LQ9H0A9 340 aa27.09■■□□□ 1.93
CDKN2A-208ENST00000498124 HOXC10Q9NYD6 342 aa27.09■■□□□ 1.93
CDKN2A-208ENST00000498124 DSG3P32926 999 aa27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 HDAC1Q13547 482 aaPredicted RBP27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 AMOTL1Q8IY63 956 aa27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 C7orf61Q8IZ16 206 aa27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 OSBP2Q969R2 916 aa27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 IVNS1ABPQ9Y6Y0 642 aa27.08■■□□□ 1.93
CDKN2A-208ENST00000498124 GSG1L2A8MUP6 293 aa27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 SHCBP1Q8NEM2 672 aa27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 ATG4CQ96DT6 458 aa27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 DDRGK1Q96HY6 314 aa27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 SH2D4AQ9H788 454 aa27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 ARPP21Q9UBL0 812 aaPredicted RBP27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 ROBO3Q96MS0 1386 aa27.07■■□□□ 1.92
CDKN2A-208ENST00000498124 WDR46O15213 610 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-208ENST00000498124 EEF2P13639 858 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-208ENST00000498124 TRPV1Q8NER1 839 aa27.06■■□□□ 1.92
CDKN2A-208ENST00000498124 COL11A1P12107 1806 aaPredicted RBP27.06■■□□□ 1.92
CDKN2A-208ENST00000498124 FLOT1O75955 427 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 ERCC3P19447 782 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 SBK1Q52WX2 424 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 MFSD14CQ5VZR4 134 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 MB21D1Q8N884 522 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 APPBP2Q92624 585 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 GPATCH3Q96I76 525 aa27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 RWDD1Q9H446 243 aaPredicted RBP27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 EPB41L4AQ9HCS5 686 aaPredicted RBP27.05■■□□□ 1.92
CDKN2A-208ENST00000498124 ADORA2AP29274 412 aa27.04■■□□□ 1.92
CDKN2A-208ENST00000498124 CYP2C19P33261 490 aa27.04■■□□□ 1.92
CDKN2A-208ENST00000498124 KANSL2Q9H9L4 492 aa27.04■■□□□ 1.92
CDKN2A-208ENST00000498124 STAP2Q9UGK3 403 aa27.04■■□□□ 1.92
CDKN2A-208ENST00000498124 ZMYND8Q9ULU4 1186 aaPredicted RBP27.04■■□□□ 1.92
CDKN2A-208ENST00000498124 M0R2C6 588 aa27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 RNF113AO15541 343 aaKnown RBP27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 NEFLP07196 543 aa27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 GIMAP6Q6P9H5 292 aa27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 OTUD7AQ8TE49 926 aaPredicted RBP27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 GDF15Q99988 308 aa27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 FBXO28Q9NVF7 368 aa27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 ADAMTS5Q9UNA0 930 aa27.03■■□□□ 1.92
CDKN2A-208ENST00000498124 A0A1W2PPC1 479 aa27.02■■□□□ 1.92
CDKN2A-208ENST00000498124 COBLO75128 1261 aa27.02■■□□□ 1.92
CDKN2A-208ENST00000498124 CYBAP13498 195 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms