RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 EPS8L3Q8TE67 593 aaKnown RBP4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 ANKRD24Q8TF21 1146 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 UBE2Q2Q8WVN8 375 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 LRRC59Q96AG4 307 aaKnown RBP4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 CCDC74AQ96AQ1 378 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 PIF1Q9H611 641 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 FOXD3Q9UJU5 478 aaPredicted RBP4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 SLC6A14Q9UN76 642 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 BCS1LQ9Y276 419 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 VIRMAQ69YN4 1812 aaKnown RBP4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 WDR17Q8IZU2 1322 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 NWD2Q9ULI1 1742 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 MRC1P22897 1456 aa4.69□□□□□ -1.66
RTN4IP1-203ENST00000498091 N4BP2Q86UW6 1770 aaPredicted RBP4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 GNAT3A8MTJ3 354 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 TOM1O60784 492 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 TNFRSF21O75509 655 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 USP17L7P0C7H9 530 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 FSTP19883 344 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 PAK2Q13177 524 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 HIF1AQ16665 826 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 MTHFSDQ2M296 383 aaKnown RBP4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 GORABQ5T7V8 394 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 NBPF6Q5VWK0 638 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 SDE2Q6IQ49 451 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 PRR23CQ6ZRP0 262 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 ZCRB1Q8TBF4 217 aaKnown RBP4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 RTF1Q92541 710 aaKnown RBP4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 ARHGAP45Q92619 1136 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 NBPF4Q96M43 638 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 FMNL2Q96PY5 1086 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 OSBPL2Q9H1P3 480 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 FAM8A1Q9UBU6 413 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 SCN11AQ9UI33 1791 aa4.68□□□□□ -1.66
RTN4IP1-203ENST00000498091 WNK3Q9BYP7 1800 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 TGFBR3LH3BV60 316 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 IPO8O15397 1037 aaKnown RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 GSC2O15499 205 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 MARCH6O60337 910 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 HOXB7P09629 217 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 FGRP09769 529 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 ATF4P18848 351 aaPredicted RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 GRIK1P39086 918 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 ST13P50502 369 aaKnown RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 GP2P55259 537 aaKnown RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 EXOSC9Q06265 439 aaKnown RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 PCSK7Q16549 785 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 PLEKHO1Q53GL0 409 aaPredicted RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 AKAP4Q5JQC9 854 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 XKR5Q6UX68 686 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 C20orf204Q6ZNR8 217 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 ZNF438Q7Z4V0 828 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 WFDC8Q8IUA0 241 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 SNX29Q8TEQ0 813 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 RAPGEF4Q8WZA2 1011 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 TSR2Q969E8 191 aaKnown RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 MDFIQ99750 246 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 ZFYVE28Q9HCC9 887 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 PRDM11Q9NQV5 511 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 FNDC3AQ9Y2H6 1198 aaKnown RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 MEGF6O75095 1541 aa4.67□□□□□ -1.66
RTN4IP1-203ENST00000498091 NRAPQ86VF7 1730 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 LRP6O75581 1613 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 PHACTR2O75167 634 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 GJA8P48165 433 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 IDH3AP50213 366 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 AFF1P51825 1210 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 IGBP1P78318 339 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 BMS1Q14692 1282 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 TAF7LQ5H9L4 462 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 C1orf141Q5JVX7 400 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 ZKSCAN2Q63HK3 967 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 NXPE4Q6UWF7 544 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 CMTR1Q8N1G2 835 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 DTWD1Q8N5C7 304 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 ZNF280CQ8ND82 737 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 DDX17Q92841 729 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 GPRASP2Q96D09 838 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 LTV1Q96GA3 475 aaPredicted RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 SUSD3Q96L08 255 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 CARD10Q9BWT7 1032 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 SRCIN1Q9C0H9 1055 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 CHMP4BQ9H444 224 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 NPHS2Q9NP85 383 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 USP20Q9Y2K6 914 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 PXDNLA1KZ92 1463 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 SHANK3Q9BYB0 1731 aa4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-203ENST00000498091 PAPPAQ13219 1627 aa4.65□□□□□ -1.66
RTN4IP1-203ENST00000498091 hCG_2014768A0A024R1R8 64 aa4.65□□□□□ -1.67
RTN4IP1-203ENST00000498091 FAM83GA6ND36 823 aa4.65□□□□□ -1.67
RTN4IP1-203ENST00000498091 UBAP1LF5GYI3 381 aa4.65□□□□□ -1.67
RTN4IP1-203ENST00000498091 VAMP4O75379 141 aa4.65□□□□□ -1.67
RTN4IP1-203ENST00000498091 BCAR3O75815 825 aa4.65□□□□□ -1.67
RTN4IP1-203ENST00000498091 POLR3DP05423 398 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms