RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GOLGB1Q14789 3259 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 CCDC88AQ3V6T2 1871 aa7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 CTSHP09668 335 aa7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 SPEM2Q0P670 501 aa7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 DDX10Q13206 875 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 SERINC3Q13530 473 aa7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 PLEKHG4Q58EX7 1191 aa7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 ZNF468Q5VIY5 522 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 DDX56Q9NY93 547 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 SIRPGQ9P1W8 387 aa7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 GDF2Q9UK05 429 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 RTCBQ9Y3I0 505 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 SOS1Q07889 1333 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-212ENST00000497993 COL11A2P13942 1736 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 FER1L6Q2WGJ9 1857 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 ZBTB39O15060 712 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 ZBTB7AO95365 584 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 EGFRP00533 1210 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 SSBP05455 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 U2AF1L5P0DN76 240 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 U2AF1Q01081 240 aaKnown RBP eCLIP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 CCINQ13939 588 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 ZNF790Q6PG37 636 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 OXCT2Q9BYC2 517 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 GSX2Q9BZM3 304 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 PNNQ9H307 717 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 TYW1Q9NV66 732 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 CACNA1SQ13698 1873 aa7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 USP42Q9H9J4 1324 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-212ENST00000497993 RPLP1P05386 114 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 NEFLP07196 543 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 CYP19A1P11511 503 aaPredicted RBP7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 ADH6P28332 368 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 GRNP28799 593 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 CRKLP46109 303 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 PAK2Q13177 524 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 ZSCAN1Q8NBB4 408 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 ACDQ96AP0 544 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 SEC16BQ96JE7 1060 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 SRPK1Q96SB4 655 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 SLC30A3Q99726 388 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 SYT17Q9BSW7 474 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 BABAM1Q9NWV8 329 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 LAMB2P55268 1798 aa7.48□□□□□ -1.21
TMEM39A-212ENST00000497993 COL15A1P39059 1388 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 SIN3BO75182 1162 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 BCRP11274 1271 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 POLD1P28340 1107 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 RPUSD2Q8IZ73 545 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 GJD3Q8N144 294 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 CMTR1Q8N1G2 835 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 RNPC3Q96LT9 517 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 CSRNP1Q96S65 589 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 TEX13AQ9BXU3 409 aaPredicted RBP7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 TRIM55Q9BYV6 548 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 FNDC3AQ9Y2H6 1198 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 CD2APQ9Y5K6 639 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 PXDNLA1KZ92 1463 aa7.47□□□□□ -1.21
TMEM39A-212ENST00000497993 GIPC1O14908 333 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 XYLBO75191 536 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 GYS1P13807 737 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 PCSK2P16519 638 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 MZF1P28698 734 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 EIF5P55010 431 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 TEFQ10587 303 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 GRIN2CQ14957 1233 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 SLCO4C1Q6ZQN7 724 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 SYT9Q86SS6 491 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 RASGRP4Q8TDF6 673 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 PNMA5Q96PV4 448 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 GEMIN8Q9NWZ8 242 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 GGA1Q9UJY5 639 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 G3BP2Q9UN86 482 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 MYH3P11055 1940 aa7.46□□□□□ -1.22
TMEM39A-212ENST00000497993 OIP5O43482 229 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 CDC45O75419 566 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 CELA2BP08218 269 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 CHMP4BP1P59074 171 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 MAP3K10Q02779 954 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 SLC39A6Q13433 755 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 TRAPPC3LQ5T215 181 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 ZNF385CQ66K41 422 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 LYPD4Q6UWN0 246 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 LRP10Q7Z4F1 713 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 DNAJC10Q8IXB1 793 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 PRPF38AQ8NAV1 312 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 GPR152Q8TDT2 470 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 FMNL2Q96PY5 1086 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 ENAMQ9NRM1 1142 aa7.45□□□□□ -1.22
TMEM39A-212ENST00000497993 RIC1Q4ADV7 1423 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 NEURL1BA8MQ27 555 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 MAP3K6O95382 1288 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms