RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 FANCBQ8NB91 859 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 PHKBQ93100 1093 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 INTS4Q96HW7 963 aaKnown RBP18.65■□□□□ 0.58
PTK7-220ENST00000497957 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 CABP5Q9NP86 173 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 NYAP2Q9P242 653 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 DOCK1Q14185 1865 aa18.65■□□□□ 0.58
PTK7-220ENST00000497957 hCG_1642624A0A1W2PR95 340 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 NT5C2P49902 561 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 DGKZQ13574 1117 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 GRM4Q14833 912 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 DCAF15Q66K64 600 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 USP17L2Q6R6M4 530 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 KLRG1Q96E93 195 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 AIFM3Q96NN9 605 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 SMC3Q9UQE7 1217 aa18.64■□□□□ 0.57
PTK7-220ENST00000497957 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
PTK7-220ENST00000497957 FUT2Q10981 343 aa18.63■□□□□ 0.57
PTK7-220ENST00000497957 SUPT20HL1Q3ZLR7 823 aa18.63■□□□□ 0.57
PTK7-220ENST00000497957 SRBD1Q8N5C6 995 aaKnown RBP18.63■□□□□ 0.57
PTK7-220ENST00000497957 MAD2L2Q9UI95 211 aa18.63■□□□□ 0.57
PTK7-220ENST00000497957 ZYXQ15942 572 aaKnown RBP18.62■□□□□ 0.57
PTK7-220ENST00000497957 FOXD4L5Q5VV16 416 aaPredicted RBP18.62■□□□□ 0.57
PTK7-220ENST00000497957 TTBK2Q6IQ55 1244 aa18.62■□□□□ 0.57
PTK7-220ENST00000497957 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.62■□□□□ 0.57
PTK7-220ENST00000497957 TMTC3Q6ZXV5 915 aa18.62■□□□□ 0.57
PTK7-220ENST00000497957 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
PTK7-220ENST00000497957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.62■□□□□ 0.571e-8■■■□□ 15.3
PTK7-220ENST00000497957 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
PTK7-220ENST00000497957 FOXD4L4Q8WXT5 416 aaPredicted RBP18.62■□□□□ 0.57
PTK7-220ENST00000497957 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
PTK7-220ENST00000497957 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
PTK7-220ENST00000497957 PDHBP11177 359 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 SCYL3Q8IZE3 742 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 PIBF1Q8WXW3 757 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 MKL1Q969V6 931 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 CLMNQ96JQ2 1002 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 ZNF408Q9H9D4 720 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 ZDHHC9Q9Y397 364 aa18.61■□□□□ 0.57
PTK7-220ENST00000497957 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.61■□□□□ 0.57
PTK7-220ENST00000497957 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 PALM3A6NDB9 673 aaPredicted RBP18.6■□□□□ 0.57
PTK7-220ENST00000497957 RAD21O60216 631 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 NDUFB10O96000 172 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 RCAN1P53805 252 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 SLFN13Q68D06 897 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 LDHDQ86WU2 507 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 LLPHQ9BRT6 129 aaKnown RBP18.6■□□□□ 0.57
PTK7-220ENST00000497957 SLC26A6Q9BXS9 759 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 UBA5Q9GZZ9 404 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 ORC3Q9UBD5 711 aaPredicted RBP18.6■□□□□ 0.57
PTK7-220ENST00000497957 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
PTK7-220ENST00000497957 CPLX1O14810 134 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 ASNSP08243 561 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 CALM1P0DP23 149 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 CALM2P0DP24 149 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 CALM3P0DP25 149 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 SNHG28P0DPA3 235 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 IFNAR1P17181 557 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 PTPRAP18433 802 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 VGLL4Q14135 290 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 KCTD1Q719H9 257 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 SPICE1Q8N0Z3 855 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 CTCFLQ8NI51 663 aaPredicted RBP18.59■□□□□ 0.57
PTK7-220ENST00000497957 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 HOOK2Q96ED9 719 aa18.59■□□□□ 0.57
PTK7-220ENST00000497957 F5H6K3 240 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 CYTH3O43739 400 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 GUCY1B3Q02153 619 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 KLRC3Q07444 240 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 CCDC96Q2M329 555 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 CHAMP1Q96JM3 812 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 TMX2Q9Y320 296 aa18.58■□□□□ 0.56
PTK7-220ENST00000497957 FMNL1O95466 1100 aaPredicted RBP18.57■□□□□ 0.56
PTK7-220ENST00000497957 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
PTK7-220ENST00000497957 SYT1P21579 422 aa18.57■□□□□ 0.56
PTK7-220ENST00000497957 SLC16A2P36021 539 aa18.57■□□□□ 0.56
PTK7-220ENST00000497957 MAP3K9P80192 1104 aa18.57■□□□□ 0.56
PTK7-220ENST00000497957 ZNF543Q08ER8 600 aa18.57■□□□□ 0.56
PTK7-220ENST00000497957 TTLL12Q14166 644 aaPredicted RBP18.57■□□□□ 0.56
PTK7-220ENST00000497957 NOL9Q5SY16 702 aaKnown RBP18.57■□□□□ 0.56
PTK7-220ENST00000497957 ELP3Q9H9T3 547 aa18.57■□□□□ 0.56
PTK7-220ENST00000497957 ARHGEF10LQ9HCE6 1279 aa18.57■□□□□ 0.56
PTK7-220ENST00000497957 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
PTK7-220ENST00000497957 RBM28Q9NW13 759 aaKnown RBP18.57■□□□□ 0.56
PTK7-220ENST00000497957 KLRF2D3W0D1 207 aa18.56■□□□□ 0.56
PTK7-220ENST00000497957 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
PTK7-220ENST00000497957 PKN1Q16512 942 aa18.56■□□□□ 0.56
PTK7-220ENST00000497957 GMCL1P1Q8NEA9 526 aa18.56■□□□□ 0.56
PTK7-220ENST00000497957 MAP3K14Q99558 947 aa18.56■□□□□ 0.56
PTK7-220ENST00000497957 CHMP5Q9NZZ3 219 aa18.56■□□□□ 0.56
PTK7-220ENST00000497957 ISY1Q9ULR0 285 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms