RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 RLFQ13129 1914 aa26.38■■□□□ 1.81
CLIC4-204ENST00000497755 MPHOSPH10O00566 681 aaKnown RBP26.38■■□□□ 1.81
CLIC4-204ENST00000497755 STRNO43815 780 aa26.38■■□□□ 1.81
CLIC4-204ENST00000497755 ADORA2AP29274 412 aa26.38■■□□□ 1.81
CLIC4-204ENST00000497755 KIAA1755Q5JYT7 1200 aa26.38■■□□□ 1.81
CLIC4-204ENST00000497755 LBHD1Q9BQE6 289 aaPredicted RBP26.38■■□□□ 1.81
CLIC4-204ENST00000497755 GJC2Q5T442 439 aaPredicted RBP26.37■■□□□ 1.81
CLIC4-204ENST00000497755 OLFML2BQ68BL8 750 aa26.37■■□□□ 1.81
CLIC4-204ENST00000497755 SPATC1LQ9H0A9 340 aa26.37■■□□□ 1.81
CLIC4-204ENST00000497755 ZNF532Q9HCE3 1301 aa26.37■■□□□ 1.81
CLIC4-204ENST00000497755 TCRBV5S4A2TA0A5A2 114 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 COBLO75128 1261 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 ERCC3P19447 782 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 FAM109BQ6ICB4 259 aaPredicted RBP26.36■■□□□ 1.81
CLIC4-204ENST00000497755 SIAH1Q8IUQ4 282 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 SHCBP1Q8NEM2 672 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 RHPN1Q8TCX5 695 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 SDR42E1Q8WUS8 393 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 TANGO6Q9C0B7 1094 aa26.36■■□□□ 1.81
CLIC4-204ENST00000497755 DCP1AQ9NPI6 582 aaPredicted RBP26.36■■□□□ 1.81
CLIC4-204ENST00000497755 CYP2D6P10635 497 aa26.35■■□□□ 1.81
CLIC4-204ENST00000497755 RTP1P59025 263 aa26.35■■□□□ 1.81
CLIC4-204ENST00000497755 SLC44A5Q8NCS7 719 aa26.35■■□□□ 1.81
CLIC4-204ENST00000497755 ARRDC4Q8NCT1 418 aa26.35■■□□□ 1.81
CLIC4-204ENST00000497755 NAV1Q8NEY1 1877 aa26.35■■□□□ 1.81
CLIC4-204ENST00000497755 DSG3P32926 999 aa26.34■■□□□ 1.81
CLIC4-204ENST00000497755 HSP90AB4PQ58FF6 505 aa26.34■■□□□ 1.81
CLIC4-204ENST00000497755 TMEM179Q6ZVK1 233 aa26.34■■□□□ 1.81
CLIC4-204ENST00000497755 LCORLQ8N3X6 602 aa26.34■■□□□ 1.81
CLIC4-204ENST00000497755 GOLIM4O00461 696 aa26.33■■□□□ 1.81
CLIC4-204ENST00000497755 ANO1Q5XXA6 986 aa26.33■■□□□ 1.81
CLIC4-204ENST00000497755 SLC39A5Q6ZMH5 540 aa26.33■■□□□ 1.81
CLIC4-204ENST00000497755 PANK1Q8TE04 598 aa26.33■■□□□ 1.81
CLIC4-204ENST00000497755 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.33■■□□□ 1.81
CLIC4-204ENST00000497755 DYNLL2Q96FJ2 89 aa26.33■■□□□ 1.81
CLIC4-204ENST00000497755 GUCD1Q96NT3 240 aa26.33■■□□□ 1.81
CLIC4-204ENST00000497755 SEPT4O43236 478 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 PRAMEF19Q5SWL8 479 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 MB21D1Q8N884 522 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 MROH8Q9H579 483 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 PRKAG2Q9UGJ0 569 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 SWAP70Q9UH65 585 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 ATP11BQ9Y2G3 1177 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 ZNF236Q9UL36 1845 aa26.32■■□□□ 1.8
CLIC4-204ENST00000497755 SMCHD1A6NHR9 2005 aa26.31■■□□□ 1.8
CLIC4-204ENST00000497755 CLASRPQ8N2M8 674 aaKnown RBP26.31■■□□□ 1.8
CLIC4-204ENST00000497755 DNAJC2Q99543 621 aaKnown RBP26.31■■□□□ 1.8
CLIC4-204ENST00000497755 ARMT1Q9H993 441 aa26.31■■□□□ 1.8
CLIC4-204ENST00000497755 TMX2Q9Y320 296 aa26.31■■□□□ 1.8
CLIC4-204ENST00000497755 ZNFX1Q9P2E3 1918 aaKnown RBP26.3■■□□□ 1.8
CLIC4-204ENST00000497755 PRKAB2O43741 272 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 AKR1B1P15121 316 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 HNRNPUQ00839 825 aaKnown RBP eCLIP26.3■■□□□ 1.8
CLIC4-204ENST00000497755 PLS1Q14651 629 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 CLEC10AQ8IUN9 316 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 ABRAQ8N0Z2 381 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 SPICE1Q8N0Z3 855 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 ATG4CQ96DT6 458 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 A0A0G2JMZ2 1700 aa26.3■■□□□ 1.8
CLIC4-204ENST00000497755 KBTBD13C9JR72 458 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 APBB1O00213 710 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 FLOT1O75955 427 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 SLFNL1Q499Z3 407 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 NCAPG2Q86XI2 1143 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 FAM161BQ96MY7 647 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 SLC5A4Q9NY91 659 aa26.29■■□□□ 1.8
CLIC4-204ENST00000497755 EYSQ5T1H1 3165 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 LTBP2Q14767 1821 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 SMIM22K7EJ46 135 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 SNX17Q15036 470 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 SHHQ15465 462 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 KIF1BPQ96EK5 621 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 MAML3Q96JK9 1138 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 VCPKMTQ9H867 229 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 ARHGEF10LQ9HCE6 1279 aa26.28■■□□□ 1.8
CLIC4-204ENST00000497755 VCANP13611 3396 aa26.27■■□□□ 1.8
CLIC4-204ENST00000497755 MYCNP04198 464 aaPredicted RBP26.27■■□□□ 1.8
CLIC4-204ENST00000497755 IFIT2P09913 472 aaKnown RBP26.27■■□□□ 1.8
CLIC4-204ENST00000497755 ADCYAP1R1P41586 468 aa26.27■■□□□ 1.8
CLIC4-204ENST00000497755 ICA1Q05084 483 aa26.27■■□□□ 1.8
CLIC4-204ENST00000497755 TMEM132BQ14DG7 1078 aa26.27■■□□□ 1.8
CLIC4-204ENST00000497755 LRRC41Q15345 812 aa26.27■■□□□ 1.8
CLIC4-204ENST00000497755 TRIM60Q495X7 471 aa26.27■■□□□ 1.8
CLIC4-204ENST00000497755 BAZ2AQ9UIF9 1905 aaKnown RBP26.26■■□□□ 1.79
CLIC4-204ENST00000497755 FCER1AP12319 257 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 ADD2P35612 726 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 SIRT2Q8IXJ6 389 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 CCDC17Q96LX7 622 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 ATP8A2Q9NTI2 1148 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 ADAMTS5Q9UNA0 930 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 MYH8P13535 1937 aa26.26■■□□□ 1.79
CLIC4-204ENST00000497755 CYP2D7A0A087X1C5 515 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 MBD4O95243 580 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 CDK8P49336 464 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 C9orf50Q5SZB4 431 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 C12orf60Q5U649 245 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 RPAP2Q8IXW5 612 aaPredicted RBP26.25■■□□□ 1.79
CLIC4-204ENST00000497755 BADQ92934 168 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 FERMT2Q96AC1 680 aa26.25■■□□□ 1.79
CLIC4-204ENST00000497755 SH2D4AQ9H788 454 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms