RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GCKP35557 465 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 NR5A1Q13285 461 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 SNCBQ16143 134 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 DIS3L2Q8IYB7 885 aaKnown RBP14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 SGSM3Q96HU1 749 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 CSRNP2Q9H175 543 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 REXO2Q9Y3B8 237 aaKnown RBP14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 CRYBG1Q9Y4K1 1723 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 ESYT3A0FGR9 886 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 GCKRQ14397 625 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 LMBR1LQ6UX01 489 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 MAATS1Q7Z4T9 603 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 ZNF473Q8WTR7 871 aaKnown RBP14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 HAUS2Q9NVX0 235 aa14.65□□□□□ -0.06
GAPVD1-220ENST00000497580 NEURL1BA8MQ27 555 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 LSP1P33241 339 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 EGFL6Q8IUX8 553 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 TEX11Q8IYF3 940 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 A0A087WZG4 1122 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 A0A1B0GUA9 196 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 CDKL5O76039 1030 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 PREPLQ4J6C6 727 aaPredicted RBP14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 APTXQ7Z2E3 356 aaKnown RBP14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 HAUS4Q9H6D7 363 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 BCCIPQ9P287 314 aaKnown RBP eCLIP14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 NCAPD2Q15021 1401 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 B4E1Z4 1266 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 FSBPO95073 299 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 ERCC5P28715 1186 aaPredicted RBP14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 NAP1L1P55209 391 aaKnown RBP14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 CFAP58Q5T655 872 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 PEAK1Q9H792 1746 aa14.64□□□□□ -0.07
GAPVD1-220ENST00000497580 KRT86O43790 486 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 AMOTL1Q8IY63 956 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 ZNF526Q8TF50 670 aaPredicted RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 CCDC51Q96ER9 411 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 ZNF594Q96JF6 807 aaPredicted RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 ZIM3Q96PE6 472 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 LACRTQ9GZZ8 138 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 DDX20Q9UHI6 824 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 COPB1P53618 953 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 KCTD19Q17RG1 926 aaPredicted RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 IQCEQ6IPM2 695 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 BAIAP2L1Q9UHR4 511 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 LUC7L2Q9Y383 392 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 DIP2CQ9Y2E4 1556 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 TTC26A0AVF1 554 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 ZBTB43O43298 467 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 CALRP27797 417 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 RNASE9P60153 205 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 RRP12Q5JTH9 1297 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 FAXDC2Q96IV6 333 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 VPS54Q9P1Q0 977 aa14.63□□□□□ -0.07
GAPVD1-220ENST00000497580 TARSL2A2RTX5 802 aaKnown RBP14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 OPLAHO14841 1288 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 HOXB7P09629 217 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 CDC25CP30307 473 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 MB21D2Q8IYB1 491 aaPredicted RBP14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 CCT8L2Q96SF2 557 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 COPRSQ9NQ92 184 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 GUCY1A2P33402 732 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 DPYDQ12882 1025 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 FMNL3Q8IVF7 1028 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 SH3GL2Q99962 352 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 TMEM131LA2VDJ0 1609 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 HERVK_113P62684 666 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 PARP9Q8IXQ6 854 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 AENQ8WTP8 325 aaKnown RBP14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 STAG1Q8WVM7 1258 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 FBXO2Q9UK22 296 aaPredicted RBP14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 ANGEL1Q9UNK9 670 aaKnown RBP14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 RIPOR2Q9Y4F9 1068 aa14.62□□□□□ -0.07
GAPVD1-220ENST00000497580 PALLDQ8WX93 1383 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 PSMD14O00487 310 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 DDR1Q08345 913 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 NLRP14Q86W24 1093 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 EIF4E1BA6NMX2 242 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 KCNJ18B7U540 433 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 ACTN4O43707 911 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 C21orf2O43822 256 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 NR1D1P20393 614 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 PBX1P40424 430 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 SARSP49591 514 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 KCNJ12Q14500 433 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 ANKRD13CQ8N6S4 541 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 TRIML1Q8N9V2 468 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 OR8K1Q8NGG5 319 aa14.61□□□□□ -0.07
GAPVD1-220ENST00000497580 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms