RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 MENTQ9BUN1 341 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 GSX2Q9BZM3 304 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 SLC13A1Q9BZW2 595 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 MUC3BQ9H195 1237 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 TMX4Q9H1E5 349 aaPredicted RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZHX3Q9H4I2 956 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZFYVE1Q9HBF4 777 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 LUC7LQ9NQ29 371 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ANLNQ9NQW6 1124 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 CACNA2D2Q9NY47 1150 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 SUSD2Q9UGT4 822 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 DDX20Q9UHI6 824 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 PNMA8BQ9ULN7 279 aaPredicted RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 PHTF1Q9UMS5 762 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 PTPN22Q9Y2R2 807 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 IPPQ9Y573 584 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 WASF2Q9Y6W5 498 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ARHGEF40Q8TER5 1519 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 TNS2Q63HR2 1409 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 KDM5CP41229 1560 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 MROH2BQ7Z745 1585 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 POLA1P09884 1462 aaPredicted RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 GRIN2AQ12879 1464 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SRCAPQ6ZRS2 3230 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 CAMTA1Q9Y6Y1 1673 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TRBV23-1A0A0A0MS06 115 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TRAV20A0A0B4J274 112 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 ABHD14A-ACY1A0A1B0GW23 586 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 MEN1O00255 615 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 PMM2O15305 246 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SLC26A4O43511 780 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 MMP20O60882 483 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 NBNO60934 754 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 PRKD3O94806 890 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 UPP2O95045 317 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 ASGR2P07307 311 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SLC5A1P13866 664 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 EPB42P16452 691 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TATP17735 454 aaPredicted RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 COPB2P35606 906 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SOX18P35713 384 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 CASP2P42575 452 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TM4SF4P48230 202 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 GEMIN4P57678 1058 aaKnown RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 KRT85P78386 507 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 GPSM2P81274 684 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TMPRSS15P98073 1019 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 RPL6Q02878 288 aaKnown RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 ABCB5Q2M3G0 1257 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TUBB8Q3ZCM7 444 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 GPR158Q5T848 1215 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 OVOS1Q6IE37 1185 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 CCDC70Q6NSX1 233 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 ADAMTSL4Q6UY14 1074 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 HDGFL2Q7Z4V5 671 aaPredicted RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 FGD2Q7Z6J4 655 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 IFNL2Q8IZJ0 200 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SDR16C5Q8N3Y7 309 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 CEP120Q8N960 986 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SLC7A3Q8WY07 619 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 JARID2Q92833 1246 aaPredicted RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 SCLYQ96I15 445 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 AGBL1Q96MI9 1066 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 NEUROD6Q96NK8 337 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 AIFM3Q96NN9 605 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SERINC2Q96SA4 455 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 KLF16Q9BXK1 252 aaPredicted RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 PHAXQ9H814 394 aaKnown RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 RSAD1Q9HA92 442 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 SLC52A2Q9HAB3 445 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 FBRSQ9HAH7 460 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 LGR6Q9HBX8 967 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 PLCB1Q9NQ66 1216 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 KLHL11Q9NVR0 708 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 ZFATQ9P243 1243 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 IP6K2Q9UHH9 426 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 PUF60Q9UHX1 559 aaKnown RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 DACH1Q9UI36 760 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 ZBTB21Q9ULJ3 1066 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 TPX2Q9ULW0 747 aaKnown RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 PCDHB10Q9UN67 800 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 GTF2A1LQ9UNN4 478 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 APOBEC2Q9Y235 224 aaKnown RBP2.39□□□□□ -2.03
UBR4-217ENST00000497018 SLC12A7Q9Y666 1083 aa2.39□□□□□ -2.03
UBR4-217ENST00000497018 AATKQ6ZMQ8 1374 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ABCC2Q92887 1545 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 A0A096LPE4 126 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 A0A1W2PPZ6 126 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 A6NNZ2 444 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 PHF20L1A8MW92 1017 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 RNF223E7ERA6 249 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 PPEF1O14829 653 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 RGS12O14924 1447 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ERC2O15083 957 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 NPHP1O15259 732 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ZEB2O60315 1214 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 GRIN3BO60391 1043 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 KPNA6O60684 536 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 TRPA1O75762 1119 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 RHOBTB3O94955 611 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms