RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 CLEC10AQ8IUN9 316 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 STAG1Q8WVM7 1258 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 RPAP3Q9H6T3 665 aaPredicted RBP22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 WDR46O15213 610 aaKnown RBP22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 RANBP6O60518 1105 aaKnown RBP22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 TTLL1O95922 423 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 HOXD10P28358 340 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 HAND2P61296 217 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 FBXO46Q6PJ61 603 aaPredicted RBP22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 CATSPERGQ6ZRH7 1159 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 KIAA1211Q6ZU35 1233 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 OTOP1Q7RTM1 612 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 SIAH1Q8IUQ4 282 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 MTMR4Q9NYA4 1195 aa22.78■■□□□ 1.24
CTDSP1-213ENST00000496785 PRMT2P55345 433 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 FCGRTP55899 365 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 FAM47AQ5JRC9 791 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 ANKRD13CQ8N6S4 541 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 CEP95Q96GE4 821 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 TANGO6Q9C0B7 1094 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 CLIP2Q9UDT6 1046 aa22.77■■□□□ 1.24
CTDSP1-213ENST00000496785 PSMC4P43686 418 aa22.76■■□□□ 1.23
CTDSP1-213ENST00000496785 RRP12Q5JTH9 1297 aaKnown RBP22.76■■□□□ 1.23
CTDSP1-213ENST00000496785 ESR2Q92731 530 aa22.76■■□□□ 1.23
CTDSP1-213ENST00000496785 P2RX7Q99572 595 aaKnown RBP22.76■■□□□ 1.23
CTDSP1-213ENST00000496785 MORF4L1Q9UBU8 362 aa22.76■■□□□ 1.23
CTDSP1-213ENST00000496785 U3KPZ7 1027 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-213ENST00000496785 LAMA4Q16363 1823 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 RAD21O60216 631 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 FMNL1O95466 1100 aaPredicted RBP22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 LBX2Q6XYB7 198 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 MKL1Q969V6 931 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 IL25Q9H293 177 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 CNNM2Q9H8M5 875 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 HOXC10Q9NYD6 342 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 MYPNQ86TC9 1320 aa22.75■■□□□ 1.23
CTDSP1-213ENST00000496785 CDC45O75419 566 aa22.74■■□□□ 1.23
CTDSP1-213ENST00000496785 COG2Q14746 738 aa22.74■■□□□ 1.23
CTDSP1-213ENST00000496785 SKAP1Q86WV1 359 aa22.74■■□□□ 1.23
CTDSP1-213ENST00000496785 SPICE1Q8N0Z3 855 aa22.74■■□□□ 1.23
CTDSP1-213ENST00000496785 GPRC5AQ8NFJ5 357 aa22.74■■□□□ 1.23
CTDSP1-213ENST00000496785 RABGAP1Q9Y3P9 1069 aa22.74■■□□□ 1.23
CTDSP1-213ENST00000496785 CCDC178Q5BJE1 867 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 TBC1D10CQ8IV04 446 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 GMCL1P1Q8NEA9 526 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 ABHD8Q96I13 439 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 ESYT1Q9BSJ8 1104 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 KRT23Q9C075 422 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 TCP11L1Q9NUJ3 509 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 STX8Q9UNK0 236 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 PTPN22Q9Y2R2 807 aa22.73■■□□□ 1.23
CTDSP1-213ENST00000496785 F5H6K3 240 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 FLOT1O75955 427 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 CCNA1P78396 465 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 KLRC3Q07444 240 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 CCAR1Q8IX12 1150 aaKnown RBP22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 MB21D1Q8N884 522 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 NBPF3Q9H094 633 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 INCENPQ9NQS7 918 aa22.72■■□□□ 1.23
CTDSP1-213ENST00000496785 SPDYE16A6NNV3 312 aaPredicted RBP22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 TNPO2O14787 897 aaKnown RBP22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 TRDNQ13061 729 aa22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 IQCA1Q86XH1 822 aa22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 COA7Q96BR5 231 aa22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 TRIM47Q96LD4 638 aa22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 PAGR1Q9BTK6 254 aa22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 ARHGAP39Q9C0H5 1083 aa22.71■■□□□ 1.23
CTDSP1-213ENST00000496785 NDUFB10O96000 172 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 ERVK-9P63128 1117 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 ERVK-24P63145 666 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 PTH1RQ03431 593 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 KIAA1755Q5JYT7 1200 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 MAP4K1Q92918 833 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 RBPJLQ9UBG7 517 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 SRRDQ9UH36 339 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 TACC3Q9Y6A5 838 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 MYH4Q9Y623 1939 aa22.7■■□□□ 1.22
CTDSP1-213ENST00000496785 NEDD4P46934 1319 aa22.69■■□□□ 1.22
CTDSP1-213ENST00000496785 MAPK4P31152 587 aa22.69■■□□□ 1.22
CTDSP1-213ENST00000496785 DSG3P32926 999 aa22.69■■□□□ 1.22
CTDSP1-213ENST00000496785 FAM83BQ5T0W9 1011 aa22.69■■□□□ 1.22
CTDSP1-213ENST00000496785 LRRC47Q8N1G4 583 aaKnown RBP22.69■■□□□ 1.22
CTDSP1-213ENST00000496785 TTC14Q96N46 770 aa22.69■■□□□ 1.22
CTDSP1-213ENST00000496785 NOVP48745 357 aa22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 SLFN13Q68D06 897 aa22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 CWC22Q9HCG8 908 aaKnown RBP22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 TXNRD2Q9NNW7 524 aa22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 ANO2Q9NQ90 1003 aa22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 IL17RBQ9NRM6 502 aa22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 HPS5Q9UPZ3 1129 aa22.68■■□□□ 1.22
CTDSP1-213ENST00000496785 KDM4AO75164 1064 aa22.67■■□□□ 1.22
CTDSP1-213ENST00000496785 ECM2O94769 699 aaPredicted RBP22.67■■□□□ 1.22
CTDSP1-213ENST00000496785 TOP1P11387 765 aaKnown RBP22.67■■□□□ 1.22
CTDSP1-213ENST00000496785 RAET1EQ8TD07 263 aa22.67■■□□□ 1.22
CTDSP1-213ENST00000496785 GMCL1Q96IK5 515 aa22.67■■□□□ 1.22
CTDSP1-213ENST00000496785 PPP1R9AQ9ULJ8 1098 aa22.67■■□□□ 1.22
CTDSP1-213ENST00000496785 NMT2O60551 498 aa22.66■■□□□ 1.22
CTDSP1-213ENST00000496785 CYP21A2P08686 494 aa22.66■■□□□ 1.22
CTDSP1-213ENST00000496785 BMP3P12645 472 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms