RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 NCLP19338 710 aaKnown RBP10□□□□□ -0.81
U2AF1-212ENST00000496462 PTH1RQ03431 593 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
U2AF1-212ENST00000496462 COA7Q96BR5 231 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 ZBED3Q96IU2 234 aaPredicted RBP10□□□□□ -0.81
U2AF1-212ENST00000496462 PAGR1Q9BTK6 254 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 DDX4Q9NQI0 724 aaKnown RBP10□□□□□ -0.81
U2AF1-212ENST00000496462 BIN2Q9UBW5 565 aaPredicted RBP10□□□□□ -0.81
U2AF1-212ENST00000496462 FAM196BA6NMK8 535 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 RPS6KB1P23443 525 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 MAP2K2P36507 400 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 NOL9Q5SY16 702 aaKnown RBP10□□□□□ -0.81
U2AF1-212ENST00000496462 BICD2Q8TD16 824 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 HHIPL1Q96JK4 782 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 VAT1LQ9HCJ6 419 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 GPCPD1Q9NPB8 672 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 ATP6V1DQ9Y5K8 247 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 ATRNL1Q5VV63 1379 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 CAPN15O75808 1086 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 AKR1B1P15121 316 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 STAT2P52630 851 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 Q6ZUG5 572 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 ADGRA1Q86SQ6 560 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 MCF2L2Q86YR7 1114 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 WNK4Q96J92 1243 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 WDR18Q9BV38 432 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 UPF3BQ9BZI7 483 aaKnown RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 VCPKMTQ9H867 229 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 PCDHAC2Q9Y5I4 1007 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 WDR33Q9C0J8 1336 aaKnown RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 CYP21A2P08686 494 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 EEF2P13639 858 aaKnown RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 INPP5BP32019 993 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 PLCD1P51178 756 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 BACE1P56817 501 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 ZKSCAN4Q969J2 545 aaPredicted RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 ZKSCAN3Q9BRR0 538 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 TCP11L1Q9NUJ3 509 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 MRPL11Q9Y3B7 192 aaKnown RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 TLL2Q9Y6L7 1015 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 TMEM232C9JQI7 657 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 AOC2O75106 756 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 LIFRP42702 1097 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 HMGCS2P54868 508 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 VGLL4Q14135 290 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 KCTD2Q14681 263 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 COG2Q14746 738 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 LRRC47Q8N1G4 583 aaKnown RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 CCDC34Q96HJ3 373 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 SPEF2Q9C093 1822 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 PRPF38AQ8NAV1 312 aaKnown RBP9.99□□□□□ -0.81
U2AF1-212ENST00000496462 SLF1Q9BQI6 1058 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 SNX14Q9Y5W7 946 aa9.99□□□□□ -0.81
U2AF1-212ENST00000496462 SCN4AP35499 1836 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 GOLGA6L22H0YM25 854 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 USP2O75604 605 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-212ENST00000496462 RASA1P20936 1047 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 ZNF76P36508 570 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 RCAN1P53805 252 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 MTMR2Q13614 643 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 SAPCD2Q86UD0 394 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 ZNF654Q8IZM8 581 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 KIAA1683Q9H0B3 1180 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 MTMR4Q9NYA4 1195 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 NOL7Q9UMY1 257 aaKnown RBP9.98□□□□□ -0.81
U2AF1-212ENST00000496462 COL2A1P02458 1487 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-212ENST00000496462 CALML3P27482 149 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 GNA11P29992 359 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 CNTNAP1P78357 1384 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 HOMER1Q86YM7 354 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 SLC44A5Q8NCS7 719 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 EPB41L4AQ9HCS5 686 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-212ENST00000496462 FMNL1O95466 1100 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-212ENST00000496462 PTPRAP18433 802 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 STK3Q13188 491 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 TKFCQ3LXA3 575 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 SPRYD7Q5W111 196 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.98□□□□□ -0.81
U2AF1-212ENST00000496462 C6orf50Q9HD87 102 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 FZD1Q9UP38 647 aa9.98□□□□□ -0.81
U2AF1-212ENST00000496462 F5H6K3 240 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 hCG_1984214I3L0E3 225 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 KLRC3Q07444 240 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 SLFNL1Q499Z3 407 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 ZNF713Q8N859 430 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-212ENST00000496462 SMARCC2Q8TAQ2 1214 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 CEP95Q96GE4 821 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 MAP3K11Q16584 847 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 ERO1AQ96HE7 468 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 ZCCHC17Q9NP64 241 aaKnown RBP9.97□□□□□ -0.81
U2AF1-212ENST00000496462 SLC25A27O95847 323 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 TSGA10IPQ3SY00 556 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 SYDE2Q5VT97 1194 aa9.97□□□□□ -0.81
U2AF1-212ENST00000496462 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms