RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RCSD1Q6JBY9 416 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 ZNF444Q8N0Y2 327 aaPredicted RBP12.63□□□□□ -0.39
CMSS1-208ENST00000496116 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 CCDC112Q8NEF3 446 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 ENOX1Q8TC92 643 aaKnown RBP12.63□□□□□ -0.39
CMSS1-208ENST00000496116 CERKQ8TCT0 537 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
CMSS1-208ENST00000496116 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 DHX58Q96C10 678 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 SH3GLB2Q9NR46 395 aa12.63□□□□□ -0.39
CMSS1-208ENST00000496116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 SLFN14P0C7P3 912 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 ATP2C1P98194 919 aaPredicted RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 ZNF174Q15697 407 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 NYAP1Q6ZVC0 841 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 SPATA20Q8TB22 786 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 NAV1Q8NEY1 1877 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 CCP110O43303 1012 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 CTIFO43310 598 aaKnown RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 CDK11BP21127 795 aaKnown RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 ERCC5P28715 1186 aaPredicted RBP12.62□□□□□ -0.39
CMSS1-208ENST00000496116 PTGDRQ13258 359 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 DIXDC1Q155Q3 683 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 CRY2Q49AN0 593 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 VSTM4Q8IW00 320 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 EPSTI1Q96J88 318 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
CMSS1-208ENST00000496116 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 UFL1O94874 794 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 PLCG2P16885 1265 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 GPSM2P81274 684 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 ZNF592Q92610 1267 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 CD209Q9NNX6 404 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 IL17RBQ9NRM6 502 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 TRMT1Q9NXH9 659 aaKnown RBP12.61□□□□□ -0.39
CMSS1-208ENST00000496116 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
CMSS1-208ENST00000496116 TUBB4AP04350 444 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 PLCD1P51178 756 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 GRM4Q14833 912 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 GRAMD1CQ8IYS0 662 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
CMSS1-208ENST00000496116 BAZ2BQ9UIF8 2168 aaKnown RBP12.6□□□□□ -0.39
CMSS1-208ENST00000496116 BBOX1O75936 387 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 SERPINB2P05120 415 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 IL1R1P14778 569 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 ARL6IP4Q66PJ3 421 aaKnown RBP12.6□□□□□ -0.39
CMSS1-208ENST00000496116 SH3RF1Q7Z6J0 888 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 BLIDQ8IZY5 108 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 IQUBQ8NA54 791 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 DPF2Q92785 391 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 PAGE5Q96GU1 130 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
CMSS1-208ENST00000496116 UBR3Q6ZT12 1888 aa12.6□□□□□ -0.39
CMSS1-208ENST00000496116 GYS1P13807 737 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 BTDP43251 543 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 AFMP43652 599 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 SYCP1Q15431 976 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 E4F1Q66K89 784 aaPredicted RBP12.59□□□□□ -0.39
CMSS1-208ENST00000496116 GALNT17Q6IS24 598 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
CMSS1-208ENST00000496116 TBC1D22AQ8WUA7 517 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 LZTS2Q9BRK4 669 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
CMSS1-208ENST00000496116 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 STX8Q9UNK0 236 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 A0A087X0B3 334 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 GPR75-ASB3A0A0A6YYF3 556 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 USP17L3A6NCW0 530 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 USP17L4A6NCW7 530 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 WNT7AO00755 349 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 ZNF18P17022 549 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 MCM7P33993 719 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 TXLNAP40222 546 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 FMR1Q06787 632 aaKnown RBP eCLIP12.59□□□□□ -0.39
CMSS1-208ENST00000496116 GRIK5Q16478 980 aa12.59□□□□□ -0.39
CMSS1-208ENST00000496116 ZNF827Q17R98 1081 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms