RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 UIMC1Q96RL1 719 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 PI4K2BG5E9Z4 385 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 ZMYND10O75800 440 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 HOXC6P09630 235 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 PTPREP23469 700 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 CAP2P40123 477 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 LRRC41Q15345 812 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 CSPP1Q1MSJ5 1256 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 KCTD17Q8N5Z5 321 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 NKX2-4Q9H2Z4 354 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 DDX4Q9NQI0 724 aaKnown RBP12□□□□□ -0.49
SMARCAL1-213ENST00000496037 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
SMARCAL1-213ENST00000496037 COG5Q9UP83 839 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 LRRC37A2A6NM11 1700 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
SMARCAL1-213ENST00000496037 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 C19orf81C9J6K1 198 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 GRB14Q14449 540 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 TWISTNBQ3B726 338 aaPredicted RBP11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 SLF2Q8IX21 1173 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 VGLL2Q8N8G2 317 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 MTIF3Q9H2K0 278 aaKnown RBP11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 PHF24Q9UPV7 400 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 RABGAP1Q9Y3P9 1069 aa11.99□□□□□ -0.49
SMARCAL1-213ENST00000496037 ATAD5Q96QE3 1844 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 GAKO14976 1311 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 DCDC2CA8MYV0 355 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 TIMP1P01033 207 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 SLC5A1P13866 664 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 FOXK2Q01167 660 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 FAM47AQ5JRC9 791 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 BEND3Q5T5X7 828 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 DPP9Q86TI2 863 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 NPLOC4Q8TAT6 608 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 KCNH6Q9H252 994 aa11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 GNL3LQ9NVN8 582 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-213ENST00000496037 SALL1Q9NSC2 1324 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 USP17L10C9JJH3 530 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 TLL1O43897 1013 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 ASNSP08243 561 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 BTDP43251 543 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 TMEM240Q5SV17 173 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 OLFML2BQ68BL8 750 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 MFSD5Q6N075 450 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 RNF180Q86T96 592 aa11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-213ENST00000496037 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 A0A1W2PQ45 241 aaPredicted RBP11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 A0A1W2PQY0 241 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 F6X3S4 739 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 FGFR2P21802 821 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 FAAP100Q0VG06 881 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 PPP1R15BQ5SWA1 713 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 LPIN2Q92539 896 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 FBXL18Q96ME1 805 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 XPNPEP3Q9NQH7 507 aa11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
SMARCAL1-213ENST00000496037 USP34Q70CQ2 3546 aa11.96□□□□□ -0.5
SMARCAL1-213ENST00000496037 RARBP10826 455 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 RALBP1Q15311 655 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 ANKRD33Q7Z3H0 272 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 HLA-CQ95604 372 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 DDX27Q96GQ7 796 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 SUCLG2Q96I99 432 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 DENND2AQ9ULE3 1009 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 TRANK1O15050 2925 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
SMARCAL1-213ENST00000496037 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 CNMDO75829 334 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 ACRP10323 421 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 CSF2RAP15509 400 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 RRP1BQ14684 758 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 C16orf59Q7L2K0 433 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 STARD7Q9NQZ5 370 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 SLC5A4Q9NY91 659 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
SMARCAL1-213ENST00000496037 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms