RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 COG2Q14746 738 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 C12orf60Q5U649 245 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 GPATCH3Q96I76 525 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 CCDC17Q96LX7 622 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 SH2D4AQ9H788 454 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 HOXC10Q9NYD6 342 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 CYP2D7A0A087X1C5 515 aa22.15■■□□□ 1.14
CLCNKA-207ENST00000495784 PTPREP23469 700 aa22.15■■□□□ 1.14
CLCNKA-207ENST00000495784 ICA1Q05084 483 aa22.15■■□□□ 1.14
CLCNKA-207ENST00000495784 LPAR1Q92633 364 aa22.15■■□□□ 1.14
CLCNKA-207ENST00000495784 C11orf49Q9H6J7 331 aa22.15■■□□□ 1.14
CLCNKA-207ENST00000495784 CDK8P49336 464 aa22.14■■□□□ 1.13
CLCNKA-207ENST00000495784 MFSD14CQ5VZR4 134 aa22.14■■□□□ 1.13
CLCNKA-207ENST00000495784 CLEC10AQ8IUN9 316 aa22.14■■□□□ 1.13
CLCNKA-207ENST00000495784 PUS7LQ9H0K6 701 aaKnown RBP22.14■■□□□ 1.13
CLCNKA-207ENST00000495784 CCND3P30281 292 aaPredicted RBP22.13■■□□□ 1.13
CLCNKA-207ENST00000495784 GRB14Q14449 540 aa22.13■■□□□ 1.13
CLCNKA-207ENST00000495784 C7orf61Q8IZ16 206 aa22.13■■□□□ 1.13
CLCNKA-207ENST00000495784 DCTPP1Q9H773 170 aa22.13■■□□□ 1.13
CLCNKA-207ENST00000495784 TMX2Q9Y320 296 aa22.13■■□□□ 1.13
CLCNKA-207ENST00000495784 SMIM22K7EJ46 135 aa22.12■■□□□ 1.13
CLCNKA-207ENST00000495784 MNX1P50219 401 aaPredicted RBP22.12■■□□□ 1.13
CLCNKA-207ENST00000495784 ATP2B2Q01814 1243 aa22.12■■□□□ 1.13
CLCNKA-207ENST00000495784 C16orf86Q6ZW13 317 aa22.12■■□□□ 1.13
CLCNKA-207ENST00000495784 SPICE1Q8N0Z3 855 aa22.12■■□□□ 1.13
CLCNKA-207ENST00000495784 PRO3102Q9H379 93 aa22.12■■□□□ 1.13
CLCNKA-207ENST00000495784 FLOT1O75955 427 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 HOXC6P09630 235 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 KIAA1755Q5JYT7 1200 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 CTR9Q6PD62 1173 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 SIAH1Q8IUQ4 282 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 MB21D1Q8N884 522 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 MOV10L1Q9BXT6 1211 aaKnown RBP22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 SPATC1LQ9H0A9 340 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 VCPKMTQ9H867 229 aa22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 ARPP21Q9UBL0 812 aaPredicted RBP22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 BAZ2AQ9UIF9 1905 aaKnown RBP22.11■■□□□ 1.13
CLCNKA-207ENST00000495784 MYH7P12883 1935 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 PLS1Q14651 629 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 TSHZ3Q63HK5 1081 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 SAMD1Q6SPF0 538 aaPredicted RBP22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 DPP9Q86TI2 863 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 KBTBD3Q8NAB2 608 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 KANSL2Q9H9L4 492 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 FLRT1Q9NZU1 646 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 MYH8P13535 1937 aa22.1■■□□□ 1.13
CLCNKA-207ENST00000495784 WDR46O15213 610 aaKnown RBP22.09■■□□□ 1.13
CLCNKA-207ENST00000495784 DSG3P32926 999 aa22.09■■□□□ 1.13
CLCNKA-207ENST00000495784 LHX8Q68G74 356 aa22.09■■□□□ 1.13
CLCNKA-207ENST00000495784 SHCBP1Q8NEM2 672 aa22.09■■□□□ 1.13
CLCNKA-207ENST00000495784 STRBPQ96SI9 672 aaKnown RBP22.09■■□□□ 1.13
CLCNKA-207ENST00000495784 STAP2Q9UGK3 403 aa22.09■■□□□ 1.13
CLCNKA-207ENST00000495784 STRNO43815 780 aa22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 EEF2P13639 858 aaKnown RBP22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 ERCC3P19447 782 aa22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 CNGA1P29973 690 aa22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 NPLOC4Q8TAT6 608 aa22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 APPBP2Q92624 585 aa22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 ATG4CQ96DT6 458 aa22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 ZMYND8Q9ULU4 1186 aaPredicted RBP22.08■■□□□ 1.13
CLCNKA-207ENST00000495784 RANBP2P49792 3224 aaKnown RBP22.08■■□□□ 1.12
CLCNKA-207ENST00000495784 A0A1W2PPC1 479 aa22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 RNF113AO15541 343 aaKnown RBP22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 ZFYP08048 801 aaPredicted RBP22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 ADORA2AP29274 412 aa22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 CYP2C19P33261 490 aa22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 NCAPG2Q86XI2 1143 aa22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 MROH8Q9H579 483 aa22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 GOPCQ9HD26 462 aa22.07■■□□□ 1.12
CLCNKA-207ENST00000495784 PFASO15067 1338 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 RAD21O60216 631 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 MSCO60682 206 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 SBK1Q52WX2 424 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 GIMAP6Q6P9H5 292 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 OSBP2Q969R2 916 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 MKNK2Q9HBH9 465 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 DDX20Q9UHI6 824 aaKnown RBP22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 ALPK3Q96L96 1907 aa22.06■■□□□ 1.12
CLCNKA-207ENST00000495784 GSG1L2A8MUP6 293 aa22.05■■□□□ 1.12
CLCNKA-207ENST00000495784 MINDY4BA8MYZ0 360 aa22.05■■□□□ 1.12
CLCNKA-207ENST00000495784 COL6A1P12109 1028 aa22.05■■□□□ 1.12
CLCNKA-207ENST00000495784 LRRFIP1Q32MZ4 808 aaKnown RBP22.05■■□□□ 1.12
CLCNKA-207ENST00000495784 STK11IPQ8N1F8 1099 aa22.05■■□□□ 1.12
CLCNKA-207ENST00000495784 SLC5A4Q9NY91 659 aa22.05■■□□□ 1.12
CLCNKA-207ENST00000495784 A0A0G2JMZ2 1700 aa22.04■■□□□ 1.12
CLCNKA-207ENST00000495784 GPAA1O43292 621 aa22.04■■□□□ 1.12
CLCNKA-207ENST00000495784 SYN1P17600 705 aa22.04■■□□□ 1.12
CLCNKA-207ENST00000495784 OLFML2BQ68BL8 750 aa22.04■■□□□ 1.12
CLCNKA-207ENST00000495784 ERC2O15083 957 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 APPP05067 770 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 GNAT2P19087 354 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 TDO2P48775 406 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 TMEM132BQ14DG7 1078 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 ABRAQ8N0Z2 381 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 FBXO28Q9NVF7 368 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 PCDHB15Q9Y5E8 787 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 RLFQ13129 1914 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 TTC41PQ6P2S7 1318 aa22.03■■□□□ 1.12
CLCNKA-207ENST00000495784 ZNF236Q9UL36 1845 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 COBLO75128 1261 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms