RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 ASNSP08243 561 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 GJB2P29033 226 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 ECE1P42892 770 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 RCAN1P53805 252 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 STAG2Q8N3U4 1231 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 NID2Q14112 1375 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 CPLX1O14810 134 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 PLEKHA8P1O95397 391 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 CALM1P0DP23 149 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 CALM2P0DP24 149 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 CALM3P0DP25 149 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 USP17L2Q6R6M4 530 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
PHF1-211ENST00000495509 MAD2L2Q9UI95 211 aa18.29■□□□□ 0.52
PHF1-211ENST00000495509 PTPDC1A2A3K4 754 aa18.28■□□□□ 0.52
PHF1-211ENST00000495509 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
PHF1-211ENST00000495509 GOLGA8HP0CJ92 632 aa18.28■□□□□ 0.52
PHF1-211ENST00000495509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.28■□□□□ 0.521e-7■■■□□ 17.9
PHF1-211ENST00000495509 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
PHF1-211ENST00000495509 PHKBQ93100 1093 aa18.28■□□□□ 0.52
PHF1-211ENST00000495509 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
PHF1-211ENST00000495509 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
PHF1-211ENST00000495509 GRM4Q14833 912 aa18.27■□□□□ 0.52
PHF1-211ENST00000495509 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.27■□□□□ 0.52
PHF1-211ENST00000495509 NBPF11Q86T75 865 aa18.27■□□□□ 0.52
PHF1-211ENST00000495509 CTCFLQ8NI51 663 aaPredicted RBP18.27■□□□□ 0.52
PHF1-211ENST00000495509 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.52
PHF1-211ENST00000495509 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.51
PHF1-211ENST00000495509 RAD21O60216 631 aa18.27■□□□□ 0.51
PHF1-211ENST00000495509 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.51
PHF1-211ENST00000495509 PDHBP11177 359 aa18.27■□□□□ 0.51
PHF1-211ENST00000495509 KIAA1755Q5JYT7 1200 aa18.27■□□□□ 0.51
PHF1-211ENST00000495509 PPP4R3BQ5MIZ7 849 aa18.27■□□□□ 0.51
PHF1-211ENST00000495509 SCYL3Q8IZE3 742 aa18.27■□□□□ 0.51
PHF1-211ENST00000495509 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.51
PHF1-211ENST00000495509 CCDC196A0A1B0GTZ2 297 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 PALM3A6NDB9 673 aaPredicted RBP18.26■□□□□ 0.51
PHF1-211ENST00000495509 F5H6K3 240 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 PTPRAP18433 802 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 NF2P35240 595 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 KLRC3Q07444 240 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 FUT2Q10981 343 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 PKP1Q13835 747 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 ZNF408Q9H9D4 720 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
PHF1-211ENST00000495509 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 hCG_1642624A0A1W2PR95 340 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 IFNAR1P17181 557 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 VGLL4Q14135 290 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 PPP2R5BQ15173 497 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 SLC35G1Q2M3R5 365 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 TMTC3Q6ZXV5 915 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 ARHGEF10LQ9HCE6 1279 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 PARP1P09874 1014 aaKnown RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 KIF5BP33176 963 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 SLFN13Q68D06 897 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 SPICE1Q8N0Z3 855 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 CLMNQ96JQ2 1002 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 PICK1Q9NRD5 415 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
PHF1-211ENST00000495509 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
PHF1-211ENST00000495509 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 KLRF2D3W0D1 207 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 NDUFB10O96000 172 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 IREB2P48200 963 aaKnown RBP18.24■□□□□ 0.51
PHF1-211ENST00000495509 NOL9Q5SY16 702 aaKnown RBP18.24■□□□□ 0.51
PHF1-211ENST00000495509 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
PHF1-211ENST00000495509 KCTD1Q719H9 257 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 SLC26A6Q9BXS9 759 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
PHF1-211ENST00000495509 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 ZHX2Q9Y6X8 837 aa18.24■□□□□ 0.51
PHF1-211ENST00000495509 ITGBL1O95965 494 aaPredicted RBP18.23■□□□□ 0.51
PHF1-211ENST00000495509 SSRP1Q08945 709 aaKnown RBP18.23■□□□□ 0.51
PHF1-211ENST00000495509 ZNF543Q08ER8 600 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 DGKZQ13574 1117 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 TTBK2Q6IQ55 1244 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 PIBF1Q8WXW3 757 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 V9GY48 417 aaPredicted RBP18.23■□□□□ 0.51
PHF1-211ENST00000495509 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
PHF1-211ENST00000495509 PAPPA2Q9BXP8 1791 aa18.22■□□□□ 0.51
PHF1-211ENST00000495509 CYTH3O43739 400 aa18.22■□□□□ 0.51
PHF1-211ENST00000495509 CDKL5O76039 1030 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms