RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 BAZ2AQ9UIF9 1905 aaKnown RBP17.08■□□□□ 0.33
SCAP-213ENST00000494938 CNMDO75829 334 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 CHMLP26374 656 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 PRMT2P55345 433 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 SPICE1Q8N0Z3 855 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 GPRC5AQ8NFJ5 357 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 LPAR1Q92633 364 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 MTMR4Q9NYA4 1195 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 CLIP2Q9UDT6 1046 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 GABRQQ9UN88 632 aa17.08■□□□□ 0.32
SCAP-213ENST00000494938 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 HOXD10P28358 340 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 COG2Q14746 738 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 LBX2Q6XYB7 198 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 RABGAP1Q9Y3P9 1069 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 ATAD5Q96QE3 1844 aa17.07■□□□□ 0.32
SCAP-213ENST00000494938 PTPRFP10586 1907 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 ORC4O43929 436 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 PRKCZQ05513 592 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 GTF3C2Q8WUA4 911 aaPredicted RBP17.06■□□□□ 0.32
SCAP-213ENST00000494938 ARMC5Q96C12 935 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 DSCC1Q9BVC3 393 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 IL17RBQ9NRM6 502 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 HOXC10Q9NYD6 342 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 GJD2Q9UKL4 321 aa17.06■□□□□ 0.32
SCAP-213ENST00000494938 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
SCAP-213ENST00000494938 F5H6K3 240 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 HAND2P61296 217 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 ERVK-9P63128 1117 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 ERVK-24P63145 666 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 KLRC3Q07444 240 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
SCAP-213ENST00000494938 MYPNQ86TC9 1320 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
SCAP-213ENST00000494938 WDR46O15213 610 aaKnown RBP17.04■□□□□ 0.32
SCAP-213ENST00000494938 TTLL1O95922 423 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 DSG3P32926 999 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 NOVP48745 357 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 FLT3LGP49771 235 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 PAGR1Q9BTK6 254 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 PORCNQ9H237 461 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 GOPCQ9HD26 462 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 CENPFP49454 3210 aa17.04■□□□□ 0.32
SCAP-213ENST00000494938 PLIN4Q96Q06 1357 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 ZNF213O14771 459 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 RANBP6O60518 1105 aaKnown RBP17.03■□□□□ 0.32
SCAP-213ENST00000494938 NMT2O60551 498 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 NDUFB10O96000 172 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 RGS19P49795 217 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 AKNAD1Q5T1N1 836 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 SH3TC2Q8TF17 1288 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 COA7Q96BR5 231 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
SCAP-213ENST00000494938 FBXO28Q9NVF7 368 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 ADAMTS5Q9UNA0 930 aa17.03■□□□□ 0.32
SCAP-213ENST00000494938 TSPY2A6NKD2 308 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 SGSM2O43147 1006 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 PTH1RQ03431 593 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 IRF5Q13568 498 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 SLC9C1Q4G0N8 1177 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 RAET1EQ8TD07 263 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 ZNF333Q96JL9 665 aa17.02■□□□□ 0.32
SCAP-213ENST00000494938 RAD21O60216 631 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 FLOT1O75955 427 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 NEFLP07196 543 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 MAPK4P31152 587 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 SOX10P56693 466 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
SCAP-213ENST00000494938 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
SCAP-213ENST00000494938 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
SCAP-213ENST00000494938 RAD50Q92878 1312 aa17■□□□□ 0.31
SCAP-213ENST00000494938 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
SCAP-213ENST00000494938 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
SCAP-213ENST00000494938 GRK4P32298 578 aa17■□□□□ 0.31
SCAP-213ENST00000494938 USP6NLQ92738 828 aa17■□□□□ 0.31
SCAP-213ENST00000494938 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
SCAP-213ENST00000494938 ZSWIM8A7E2V4 1837 aa16.99■□□□□ 0.31
SCAP-213ENST00000494938 ADCY3O60266 1144 aa16.99■□□□□ 0.31
SCAP-213ENST00000494938 TMEM132BQ14DG7 1078 aa16.99■□□□□ 0.31
SCAP-213ENST00000494938 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
SCAP-213ENST00000494938 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms