RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 CALM1P0DP23 149 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 CALM2P0DP24 149 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 CALM3P0DP25 149 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 EEF2P13639 858 aaKnown RBP14.13□□□□□ -0.15
BRD3-206ENST00000494743 CDC27P30260 824 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 INPP5BP32019 993 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
BRD3-206ENST00000494743 MAP1SQ66K74 1059 aaPredicted RBP14.13□□□□□ -0.15
BRD3-206ENST00000494743 SYNE3Q6ZMZ3 975 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 FANCBQ8NB91 859 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 WRNIP1Q96S55 665 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.13□□□□□ -0.15
BRD3-206ENST00000494743 CLIP2Q9UDT6 1046 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 NAP1L2Q9ULW6 460 aaPredicted RBP14.13□□□□□ -0.15
BRD3-206ENST00000494743 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 FZD1Q9UP38 647 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 PAPPA2Q9BXP8 1791 aa14.13□□□□□ -0.15
BRD3-206ENST00000494743 THSD7BQ9C0I4 1608 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 USP2O75604 605 aaPredicted RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 SNHG28P0DPA3 235 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 ADD1P35611 737 aaKnown RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 RAB3GAP1Q15042 981 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 PPP2R5BQ15173 497 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 NTRK3Q16288 839 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 RTN1Q16799 776 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 NOL9Q5SY16 702 aaKnown RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 SCYL3Q8IZE3 742 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 SPRYD3Q8NCJ5 442 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 LLPHQ9BRT6 129 aaKnown RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
BRD3-206ENST00000494743 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
BRD3-206ENST00000494743 A0A1W2PRG0 241 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 RASSF10A6NK89 507 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 DHX16O60231 1041 aaKnown RBP14.11□□□□□ -0.15
BRD3-206ENST00000494743 HSP90AA1P07900 732 aaKnown RBP14.11□□□□□ -0.15
BRD3-206ENST00000494743 GRM4Q14833 912 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 MAP3K11Q16584 847 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 DEFB115Q30KQ5 88 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 RASGRP2Q7LDG7 609 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 NUP133Q8WUM0 1156 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 ZKSCAN4Q969J2 545 aaPredicted RBP14.11□□□□□ -0.15
BRD3-206ENST00000494743 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 MYH8P13535 1937 aa14.11□□□□□ -0.15
BRD3-206ENST00000494743 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
BRD3-206ENST00000494743 CCDC196A0A1B0GTZ2 297 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 TRAF5O00463 557 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
BRD3-206ENST00000494743 JAK2O60674 1132 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 PDHBP11177 359 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 NF2P35240 595 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 ECE1P42892 770 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 FUT2Q10981 343 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.1□□□□□ -0.15
BRD3-206ENST00000494743 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 GMCL1P1Q8NEA9 526 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 ACER1Q8TDN7 264 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 CWC22Q9HCG8 908 aaKnown RBP14.1□□□□□ -0.15
BRD3-206ENST00000494743 RBM28Q9NW13 759 aaKnown RBP14.1□□□□□ -0.15
BRD3-206ENST00000494743 MAD2L2Q9UI95 211 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
BRD3-206ENST00000494743 PALM3A6NDB9 673 aaPredicted RBP14.09□□□□□ -0.15
BRD3-206ENST00000494743 DTNBO60941 627 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 ITGBL1O95965 494 aaPredicted RBP14.09□□□□□ -0.15
BRD3-206ENST00000494743 IFNAR1P17181 557 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 PTPRAP18433 802 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 ATP2B2Q01814 1243 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 CCDC84Q86UT8 332 aaPredicted RBP14.09□□□□□ -0.15
BRD3-206ENST00000494743 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
BRD3-206ENST00000494743 MCOLN1Q9GZU1 580 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 SMC3Q9UQE7 1217 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
BRD3-206ENST00000494743 USP17L5A8MUK1 530 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 CPLX1O14810 134 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 CDKL5O76039 1030 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 PLEKHA8P1O95397 391 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 FDPSP14324 419 aaKnown RBP14.08□□□□□ -0.16
BRD3-206ENST00000494743 GJB2P29033 226 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 KIF5BP33176 963 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 IREB2P48200 963 aaKnown RBP14.08□□□□□ -0.16
BRD3-206ENST00000494743 MAP3K9P80192 1104 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 HMGN5P82970 282 aaKnown RBP14.08□□□□□ -0.16
BRD3-206ENST00000494743 FMR1Q06787 632 aaKnown RBP eCLIP14.08□□□□□ -0.16
BRD3-206ENST00000494743 PRKG1Q13976 671 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 VGLL4Q14135 290 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 USP17L2Q6R6M4 530 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 STAG2Q8N3U4 1231 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 GMCL1Q96IK5 515 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 BEGAINQ9BUH8 593 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 WDR18Q9BV38 432 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 SH2D4AQ9H788 454 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 DOCK1Q14185 1865 aa14.08□□□□□ -0.16
BRD3-206ENST00000494743 F5H6K3 240 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms