RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SAR1BQ9Y6B6 198 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 MYH13Q9UKX3 1938 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 DNM1LO00429 736 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 CDKL5O76039 1030 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 HMOX1P09601 288 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 LINGO3P0C6S8 592 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 FDPSP14324 419 aaKnown RBP5.38□□□□□ -1.55
PRKD3-210ENST00000494667 SAFB2Q14151 953 aaKnown RBP eCLIP5.38□□□□□ -1.55
PRKD3-210ENST00000494667 ITIH4Q14624 930 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 MTF1Q14872 753 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 SEPT2Q15019 361 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC57Q2TAC2 916 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 SLC30A9Q6PML9 568 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 Q6ZUG5 572 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC121Q6ZUS5 278 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 SPATA21Q7Z572 469 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 SPDL1Q96EA4 605 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 MAP3K14Q99558 947 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 DESI2Q9BSY9 194 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 FTOQ9C0B1 505 aaKnown RBP eCLIP5.38□□□□□ -1.55
PRKD3-210ENST00000494667 EHD4Q9H223 541 aa5.38□□□□□ -1.55
PRKD3-210ENST00000494667 LAMB4A4D0S4 1761 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 A0A087WWV3 80 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SURF6O75683 361 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CNGA1P29973 690 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ADKP55263 362 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 MEA1Q16626 185 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 AMOTQ4VCS5 1084 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CLASRPQ8N2M8 674 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 RIN2Q8WYP3 895 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 MED15Q96RN5 788 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 MMS19Q96T76 1030 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 DNAJC7Q99615 494 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 REXO2Q9Y3B8 237 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 A0A0D9SFI3 127 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SPDYE3A6NKU9 549 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 F6X3S4 739 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 TULP1O00294 542 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ZSCAN9O15535 394 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SYKP43405 635 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ERVK-24P63145 666 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PDE4BQ07343 736 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 KCNB1Q14721 858 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 AGBL2Q5U5Z8 902 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SPATA1Q5VX52 437 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 TMEM132EQ6IEE7 984 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC70Q6NSX1 233 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 KANK3Q6NY19 840 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SPDYE1Q8NFV5 336 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PIK3R5Q8WYR1 880 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 IFT43Q96FT9 208 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ATP6V1G3Q96LB4 118 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ZNF570Q96NI8 536 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PLEKHG4BQ96PX9 1271 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 DSCC1Q9BVC3 393 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC134Q9H6E4 229 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 IL1RAPL2Q9NP60 686 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ABHD10Q9NUJ1 306 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 NOP53Q9NZM5 478 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 RNF14Q9UBS8 474 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 MAN1B1Q9UKM7 699 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 GMEB1Q9Y692 573 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CLIC4Q9Y696 253 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 LRP6O75581 1613 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SLIT3O75094 1523 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 HSF2BPO75031 334 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 GYPCP04921 128 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CCND1P24385 295 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ARID4AP29374 1257 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ALDH1B1P30837 517 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CASP14P31944 242 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 GBP2P32456 591 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PAPOLAP51003 745 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 RBL2Q08999 1139 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SFSWAPQ12872 951 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CUL4BQ13620 913 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 STK38Q15208 465 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SHC4Q6S5L8 630 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 FOXP4Q8IVH2 680 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SH3TC2Q8TF17 1288 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 RNPC3Q96LT9 517 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CDC5LQ99459 802 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 SAMM50Q9Y512 469 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ZNF609O15014 1411 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 ENO4A6NNW6 628 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PRC1O43663 620 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 AP1G2O75843 785 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 MYBP10242 640 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 NR1D1P20393 614 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PSMC4P43686 418 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 BIRC3Q13489 604 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 IFI16Q16666 785 aaKnown RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 BEND3Q5T5X7 828 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 TRIM74Q86UV6 250 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 TRIM73Q86UV7 250 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 FAM81AQ8TBF8 368 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 LZICQ8WZA0 190 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms