RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 EPB41L4AQ9HCS5 686 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-216ENST00000494613 BTBD7Q9P203 1132 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 DDX60LQ5H9U9 1706 aaKnown RBP18.66■□□□□ 0.58
LIMS2-216ENST00000494613 SGPL1O95470 568 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 TDO2P48775 406 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 ATP2B2Q01814 1243 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 GPR142Q7Z601 462 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 PLEKHH3Q7Z736 793 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 SPICE1Q8N0Z3 855 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 USP6NLQ92738 828 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 EVI5LQ96CN4 794 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
LIMS2-216ENST00000494613 MYH7P12883 1935 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 SPDYE16A6NNV3 312 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-216ENST00000494613 RASA1P20936 1047 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 CCNA1P78396 465 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 MORN1Q5T089 497 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 U2AF1L4Q8WU68 220 aaKnown RBP18.65■□□□□ 0.58
LIMS2-216ENST00000494613 LPAR1Q92633 364 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 SHISA4Q96DD7 197 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
LIMS2-216ENST00000494613 TFRCP02786 760 aaKnown RBP18.64■□□□□ 0.57
LIMS2-216ENST00000494613 XRCC5P13010 732 aaKnown RBP18.64■□□□□ 0.57
LIMS2-216ENST00000494613 DSG3P32926 999 aa18.64■□□□□ 0.57
LIMS2-216ENST00000494613 TRIM32Q13049 653 aa18.64■□□□□ 0.57
LIMS2-216ENST00000494613 PRPF38BQ5VTL8 546 aaKnown RBP18.64■□□□□ 0.57
LIMS2-216ENST00000494613 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-216ENST00000494613 NACAP1Q9BZK3 213 aa18.64■□□□□ 0.57
LIMS2-216ENST00000494613 TANGO6Q9C0B7 1094 aa18.64■□□□□ 0.57
LIMS2-216ENST00000494613 HMGCRP04035 888 aa18.63■□□□□ 0.57
LIMS2-216ENST00000494613 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
LIMS2-216ENST00000494613 CHD1LQ86WJ1 897 aa18.63■□□□□ 0.57
LIMS2-216ENST00000494613 DEFB118Q96PH6 123 aa18.63■□□□□ 0.57
LIMS2-216ENST00000494613 MKI67P46013 3256 aaKnown RBP18.63■□□□□ 0.57
LIMS2-216ENST00000494613 BRCA2P51587 3418 aa18.63■□□□□ 0.57
LIMS2-216ENST00000494613 PRDM1O75626 825 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 NUCB1Q02818 461 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 SOCS4Q8WXH5 440 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 TRIB2Q92519 343 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 ZNF287Q9HBT7 754 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 CWC22Q9HCG8 908 aaKnown RBP18.62■□□□□ 0.57
LIMS2-216ENST00000494613 PAK6Q9NQU5 681 aaPredicted RBP18.62■□□□□ 0.57
LIMS2-216ENST00000494613 NYAP2Q9P242 653 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 RPTORQ8N122 1335 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 PDE4DIPQ5VU43 2346 aa18.62■□□□□ 0.57
LIMS2-216ENST00000494613 RBBP6Q7Z6E9 1792 aaKnown RBP18.61■□□□□ 0.57
LIMS2-216ENST00000494613 FLOT1O75955 427 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 PTPREP23469 700 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 WDR78Q5VTH9 848 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 PLEKHM2Q8IWE5 1019 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 MOV10L1Q9BXT6 1211 aaKnown RBP18.61■□□□□ 0.57
LIMS2-216ENST00000494613 NAPBQ9H115 298 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 HMX1Q9NP08 348 aaPredicted RBP18.61■□□□□ 0.57
LIMS2-216ENST00000494613 HELLSQ9NRZ9 838 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 CLIP2Q9UDT6 1046 aa18.61■□□□□ 0.57
LIMS2-216ENST00000494613 SLC15A5A6NIM6 579 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
LIMS2-216ENST00000494613 FOXP2O15409 715 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 RAD21O60216 631 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 CAPN2P17655 700 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 RGS2P41220 211 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 MAP2K5Q13163 448 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 CCL14Q16627 93 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-216ENST00000494613 UBE2Q1Q7Z7E8 422 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 TRMT44Q8IYL2 757 aaKnown RBP18.6■□□□□ 0.57
LIMS2-216ENST00000494613 ATG4CQ96DT6 458 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.6■□□□□ 0.57
LIMS2-216ENST00000494613 GOPCQ9HD26 462 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 ADAMTS5Q9UNA0 930 aa18.6■□□□□ 0.57
LIMS2-216ENST00000494613 ROBO3Q96MS0 1386 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 TRIM6-TRIM34B2RNG4 842 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 F5H6K3 240 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 PDE4BQ07343 736 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 KLRC3Q07444 240 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 PPARAQ07869 468 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 CACNB2Q08289 660 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-216ENST00000494613 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 TICAM2Q86XR7 235 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 MKL1Q969V6 931 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 RILPL2Q969X0 211 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 SPATC1LQ9H0A9 340 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 CRISPLD2Q9H0B8 497 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 IVNS1ABPQ9Y6Y0 642 aa18.59■□□□□ 0.57
LIMS2-216ENST00000494613 STRNO43815 780 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 SLC3A2P08195 630 aaKnown RBP18.58■□□□□ 0.56
LIMS2-216ENST00000494613 TFAP4Q01664 338 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 PLS1Q14651 629 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 MAP3K21Q5TCX8 1036 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 VPS53Q5VIR6 699 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 OSBPL3Q9H4L5 887 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 MTMR4Q9NYA4 1195 aa18.58■□□□□ 0.56
LIMS2-216ENST00000494613 ZKSCAN1P17029 563 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms