RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
ZIC4-216ENST00000494569 HHIPL2Q6UWX4 724 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 BICD2Q8TD16 824 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 MAD2L2Q9UI95 211 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 BTBD18B2RXH4 712 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 GTF2IP78347 998 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 TFAP4Q01664 338 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 DPP8Q6V1X1 898 aaPredicted RBP12.68□□□□□ -0.38
ZIC4-216ENST00000494569 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 NDUFA8P51970 172 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
ZIC4-216ENST00000494569 CAMK4Q16566 473 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 RESP18Q5W5W9 173 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 SHC4Q6S5L8 630 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
ZIC4-216ENST00000494569 DIS3L2Q8IYB7 885 aaKnown RBP12.68□□□□□ -0.38
ZIC4-216ENST00000494569 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 KCNF1Q9H3M0 494 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 GOLGA6L4A6NEF3 574 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 M0R2N6 131 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 CDK8P49336 464 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 TIGD1Q96MW7 591 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 RRAGCQ9HB90 399 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 COL4A5P29400 1685 aa12.68□□□□□ -0.38
ZIC4-216ENST00000494569 SARM1Q6SZW1 724 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 SLC44A5Q8NCS7 719 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 NUP133Q8WUM0 1156 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 PALM3A6NDB9 673 aaPredicted RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 ME1P48163 572 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 PFKFB3Q16875 520 aaPredicted RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 APOBEC3HQ6NTF7 200 aaKnown RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 PODNQ7Z5L7 613 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 DDX4Q9NQI0 724 aaKnown RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 FBXO2Q9UK22 296 aaPredicted RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 TRIM29Q14134 588 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 STK38Q15208 465 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 EARS2Q5JPH6 523 aaKnown RBP12.67□□□□□ -0.38
ZIC4-216ENST00000494569 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
ZIC4-216ENST00000494569 DACT2Q5SW24 774 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 EYA3Q99504 573 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
ZIC4-216ENST00000494569 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
ZIC4-216ENST00000494569 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
ZIC4-216ENST00000494569 USP17L3A6NCW0 530 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 USP17L4A6NCW7 530 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 CUTAO60888 179 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
ZIC4-216ENST00000494569 NR5A1Q13285 461 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 USP17L1Q7RTZ2 530 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
ZIC4-216ENST00000494569 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
ZIC4-216ENST00000494569 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
ZIC4-216ENST00000494569 TPM2P07951 284 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 PFKFB1P16118 471 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 ZDHHC15Q96MV8 337 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 TMEM47Q9BQJ4 181 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 CBX8Q9HC52 389 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 A0A1B0GVL5 298 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 GLTPD2A6NH11 291 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 H0YIN7 160 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 CAVIN2O95810 425 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 VEGFAP15692 232 aaPredicted RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 PTPREP23469 700 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 HTRA3P83110 453 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 STRIP1Q5VSL9 837 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 CYTH3O43739 400 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 LMNB1P20700 586 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 CDC25BP30305 580 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms