RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 IGKV6D-41A0A0C4DH26 115 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 CYTH3O43739 400 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 KRT2P35908 639 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 EARS2Q5JPH6 523 aaKnown RBP19.04■□□□□ 0.64
ATG4B-225ENST00000494465 RTKN2Q8IZC4 609 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 ANP32BQ92688 251 aaKnown RBP19.04■□□□□ 0.64
ATG4B-225ENST00000494465 FAM205CA6NFA0 338 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 AKR1B1P15121 316 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 SHMT1P34896 483 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 GNAQP50148 359 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 UVSSAQ2YD98 709 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 IDI2Q9BXS1 227 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 FAM198AQ9UFP1 575 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 SWAP70Q9UH65 585 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
ATG4B-225ENST00000494465 KINO60870 393 aaKnown RBP19.03■□□□□ 0.64
ATG4B-225ENST00000494465 TOP1P11387 765 aaKnown RBP19.03■□□□□ 0.64
ATG4B-225ENST00000494465 CACNB3P54284 484 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 PIBF1Q8WXW3 757 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 CABP5Q9NP86 173 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 PCDHB6Q9Y5E3 794 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 SHC4Q6S5L8 630 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 JMYQ8N9B5 988 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 EHD4Q9H223 541 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 MTMR4Q9NYA4 1195 aa19.03■□□□□ 0.64
ATG4B-225ENST00000494465 CTAGE5O15320 804 aa19.02■□□□□ 0.64
ATG4B-225ENST00000494465 DNAJC18Q9H819 358 aa19.02■□□□□ 0.64
ATG4B-225ENST00000494465 MTMR7Q9Y216 660 aa19.02■□□□□ 0.64
ATG4B-225ENST00000494465 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 ADAMTS3O15072 1205 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 SLURP2P0DP57 97 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 PFKFB1P16118 471 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.632e-12■■■□□ 18.6
ATG4B-225ENST00000494465 NOM1Q5C9Z4 860 aaKnown RBP19.01■□□□□ 0.63
ATG4B-225ENST00000494465 HPSEQ9Y251 543 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 BRCA1P38398 1863 aaKnown RBP19.01■□□□□ 0.63
ATG4B-225ENST00000494465 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
ATG4B-225ENST00000494465 GOLGA8HP0CJ92 632 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 SH3BP5LQ7L8J4 393 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 CLIC6Q96NY7 704 aa19.01■□□□□ 0.63
ATG4B-225ENST00000494465 ZBTB7AO95365 584 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 HLA-DOAP06340 250 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 CCDC125Q86Z20 511 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 LZTS2Q9BRK4 669 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 ZNF277Q9NRM2 450 aaPredicted RBP19■□□□□ 0.63
ATG4B-225ENST00000494465 DDTLA6NHG4 134 aaPredicted RBP19■□□□□ 0.63
ATG4B-225ENST00000494465 KLRF2D3W0D1 207 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 CUTAO60888 179 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 TCP10Q12799 353 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 RESP18Q5W5W9 173 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 TYW1BQ6NUM6 668 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 SPZ1Q9BXG8 430 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 SH3GLB2Q9NR46 395 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 MYH4Q9Y623 1939 aa19■□□□□ 0.63
ATG4B-225ENST00000494465 ZNF202O95125 648 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 CLEC10AQ8IUN9 316 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 GPKOWQ92917 476 aaPredicted RBP eCLIP18.99■□□□□ 0.633e-7■□□□□ 9.2
ATG4B-225ENST00000494465 FBXO2Q9UK22 296 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-225ENST00000494465 WNT7AO00755 349 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 PARP1P09874 1014 aaKnown RBP18.99■□□□□ 0.63
ATG4B-225ENST00000494465 PTPREP23469 700 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 NLRP5P59047 1200 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 CFAP100Q494V2 611 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 ANO6Q4KMQ2 910 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 SASS6Q6UVJ0 657 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 KRI1Q8N9T8 703 aaKnown RBP18.99■□□□□ 0.63
ATG4B-225ENST00000494465 FAM200AQ8TCP9 573 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 GMLQ99445 158 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 DHX36Q9H2U1 1008 aaKnown RBP18.99■□□□□ 0.63
ATG4B-225ENST00000494465 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 BRMS1Q9HCU9 246 aa18.99■□□□□ 0.63
ATG4B-225ENST00000494465 MORC2Q9Y6X9 1032 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-225ENST00000494465 GRIN1Q05586 938 aa18.98■□□□□ 0.63
ATG4B-225ENST00000494465 RSBN1LQ6PCB5 846 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-225ENST00000494465 PRMT6Q96LA8 375 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-225ENST00000494465 TDRD3Q9H7E2 651 aaKnown RBP18.98■□□□□ 0.63
ATG4B-225ENST00000494465 USP17L5A8MUK1 530 aa18.98■□□□□ 0.63
ATG4B-225ENST00000494465 VIL1P09327 827 aaKnown RBP18.98■□□□□ 0.63
ATG4B-225ENST00000494465 PDHBP11177 359 aa18.98■□□□□ 0.63
ATG4B-225ENST00000494465 WWC2Q6AWC2 1192 aa18.98■□□□□ 0.63
ATG4B-225ENST00000494465 LARGE2Q8N3Y3 721 aa18.98■□□□□ 0.63
ATG4B-225ENST00000494465 SNHG28P0DPA3 235 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 ATP2B1P20020 1258 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 SMARCA1P28370 1054 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 TGFB2P61812 414 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 TRIM75PA6NK02 468 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 M0R2N6 131 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 PSMD14O00487 310 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 RAD17O75943 681 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 TTLL1O95922 423 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 EIF6P56537 245 aaKnown RBP18.97■□□□□ 0.63
ATG4B-225ENST00000494465 LRRC47Q8N1G4 583 aaKnown RBP18.97■□□□□ 0.63
ATG4B-225ENST00000494465 ERCC4Q92889 916 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-225ENST00000494465 VPS33BQ9H267 617 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 PI4KBQ9UBF8 816 aa18.97■□□□□ 0.63
ATG4B-225ENST00000494465 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-225ENST00000494465 STXBP3O00186 592 aa18.96■□□□□ 0.63
ATG4B-225ENST00000494465 CALML3P27482 149 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms