RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 CLIP2Q9UDT6 1046 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 CTNNA3Q9UI47 895 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 TSPY2A6NKD2 308 aa27.77■■■□□ 2.04
CLIC3-203ENST00000494426 RANBP6O60518 1105 aaKnown RBP27.77■■■□□ 2.04
CLIC3-203ENST00000494426 CTGFP29279 349 aa27.77■■■□□ 2.04
CLIC3-203ENST00000494426 IRX3P78415 501 aaPredicted RBP27.77■■■□□ 2.04
CLIC3-203ENST00000494426 LACTBP83111 547 aaPredicted RBP27.77■■■□□ 2.04
CLIC3-203ENST00000494426 MFSD6Q6ZSS7 791 aa27.77■■■□□ 2.04
CLIC3-203ENST00000494426 TNS4Q8IZW8 715 aa27.77■■■□□ 2.04
CLIC3-203ENST00000494426 MKL1Q969V6 931 aa27.77■■■□□ 2.04
CLIC3-203ENST00000494426 ARHGAP39Q9C0H5 1083 aa27.77■■■□□ 2.04
CLIC3-203ENST00000494426 RPAP3Q9H6T3 665 aaPredicted RBP27.77■■■□□ 2.04
CLIC3-203ENST00000494426 CAPN15O75808 1086 aa27.76■■■□□ 2.03
CLIC3-203ENST00000494426 RRP12Q5JTH9 1297 aaKnown RBP27.76■■■□□ 2.03
CLIC3-203ENST00000494426 SPICE1Q8N0Z3 855 aa27.76■■■□□ 2.03
CLIC3-203ENST00000494426 ANKRD13CQ8N6S4 541 aa27.76■■■□□ 2.03
CLIC3-203ENST00000494426 LPAR1Q92633 364 aa27.76■■■□□ 2.03
CLIC3-203ENST00000494426 MCOLN1Q9GZU1 580 aa27.76■■■□□ 2.03
CLIC3-203ENST00000494426 RLFQ13129 1914 aa27.76■■■□□ 2.03
CLIC3-203ENST00000494426 NEDD4P46934 1319 aa27.75■■■□□ 2.03
CLIC3-203ENST00000494426 NMT2O60551 498 aa27.75■■■□□ 2.03
CLIC3-203ENST00000494426 PCP11498 1178 aaKnown RBP27.75■■■□□ 2.03
CLIC3-203ENST00000494426 GCLCP48506 637 aaPredicted RBP27.75■■■□□ 2.03
CLIC3-203ENST00000494426 HERVK_113P62684 666 aa27.75■■■□□ 2.03
CLIC3-203ENST00000494426 IMMTQ16891 758 aaKnown RBP27.75■■■□□ 2.03
CLIC3-203ENST00000494426 MAP4K1Q92918 833 aa27.75■■■□□ 2.03
CLIC3-203ENST00000494426 TOMM22Q9NS69 142 aa27.75■■■□□ 2.03
CLIC3-203ENST00000494426 PEX10O60683 326 aa27.74■■■□□ 2.03
CLIC3-203ENST00000494426 TTLL1O95922 423 aa27.74■■■□□ 2.03
CLIC3-203ENST00000494426 NOVP48745 357 aa27.74■■■□□ 2.03
CLIC3-203ENST00000494426 OTOP1Q7RTM1 612 aa27.74■■■□□ 2.03
CLIC3-203ENST00000494426 RNF41Q9H4P4 317 aaPredicted RBP27.74■■■□□ 2.03
CLIC3-203ENST00000494426 MGAMO43451 1857 aa27.74■■■□□ 2.03
CLIC3-203ENST00000494426 LSG1Q9H089 658 aaKnown RBP27.73■■■□□ 2.03
CLIC3-203ENST00000494426 TXNRD2Q9NNW7 524 aa27.73■■■□□ 2.03
CLIC3-203ENST00000494426 RBPJLQ9UBG7 517 aa27.73■■■□□ 2.03
CLIC3-203ENST00000494426 TRIM17Q9Y577 477 aa27.73■■■□□ 2.03
CLIC3-203ENST00000494426 PARP14Q460N5 1801 aa27.73■■■□□ 2.03
CLIC3-203ENST00000494426 F5H6K3 240 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 WDR46O15213 610 aaKnown RBP27.72■■■□□ 2.03
CLIC3-203ENST00000494426 CDC45O75419 566 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 ECM2O94769 699 aaPredicted RBP27.72■■■□□ 2.03
CLIC3-203ENST00000494426 CYP21A2P08686 494 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 KLRC3Q07444 240 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 FAM110CQ1W6H9 321 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 EFCC1Q9HA90 598 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 GOPCQ9HD26 462 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 TCP11L1Q9NUJ3 509 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 MORF4L1Q9UBU8 362 aa27.72■■■□□ 2.03
CLIC3-203ENST00000494426 U3KPZ7 1027 aaPredicted RBP27.72■■■□□ 2.03
CLIC3-203ENST00000494426 LRRC47Q8N1G4 583 aaKnown RBP27.71■■■□□ 2.03
CLIC3-203ENST00000494426 SYNPO2Q9UMS6 1093 aa27.71■■■□□ 2.03
CLIC3-203ENST00000494426 SPDYE16A6NNV3 312 aaPredicted RBP27.7■■■□□ 2.02
CLIC3-203ENST00000494426 NDUFB10O96000 172 aa27.7■■■□□ 2.02
CLIC3-203ENST00000494426 PSMC4P43686 418 aa27.7■■■□□ 2.02
CLIC3-203ENST00000494426 KIF22Q14807 665 aa27.7■■■□□ 2.02
CLIC3-203ENST00000494426 TRIM47Q96LD4 638 aa27.7■■■□□ 2.02
CLIC3-203ENST00000494426 TANGO6Q9C0B7 1094 aa27.7■■■□□ 2.02
CLIC3-203ENST00000494426 TAF6LQ9Y6J9 622 aa27.7■■■□□ 2.02
CLIC3-203ENST00000494426 RAD21O60216 631 aa27.69■■■□□ 2.02
CLIC3-203ENST00000494426 CNMDO75829 334 aa27.69■■■□□ 2.02
CLIC3-203ENST00000494426 COG2Q14746 738 aa27.69■■■□□ 2.02
CLIC3-203ENST00000494426 PKN2Q16513 984 aaKnown RBP27.69■■■□□ 2.02
CLIC3-203ENST00000494426 Q3C1V9 767 aa27.69■■■□□ 2.02
CLIC3-203ENST00000494426 LBX2Q6XYB7 198 aa27.69■■■□□ 2.02
CLIC3-203ENST00000494426 STX8Q9UNK0 236 aa27.69■■■□□ 2.02
CLIC3-203ENST00000494426 RBM8AQ9Y5S9 174 aaKnown RBP27.69■■■□□ 2.02
CLIC3-203ENST00000494426 B4E1Z4 1266 aa27.68■■■□□ 2.02
CLIC3-203ENST00000494426 FAM83BQ5T0W9 1011 aa27.68■■■□□ 2.02
CLIC3-203ENST00000494426 KIAA1211Q6ZU35 1233 aa27.68■■■□□ 2.02
CLIC3-203ENST00000494426 GMCL1P1Q8NEA9 526 aa27.68■■■□□ 2.02
CLIC3-203ENST00000494426 GTF3C2Q8WUA4 911 aaPredicted RBP27.68■■■□□ 2.02
CLIC3-203ENST00000494426 ESR2Q92731 530 aa27.68■■■□□ 2.02
CLIC3-203ENST00000494426 NUP88Q99567 741 aaPredicted RBP27.68■■■□□ 2.02
CLIC3-203ENST00000494426 KDM4AO75164 1064 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 DSG3P32926 999 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 ARHGEF6Q15052 776 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 PPP4R3BQ5MIZ7 849 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 RCSD1Q6JBY9 416 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 FBXO46Q6PJ61 603 aaPredicted RBP27.67■■■□□ 2.02
CLIC3-203ENST00000494426 HOXC10Q9NYD6 342 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 ZSWIM5Q9P217 1185 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 PTPN22Q9Y2R2 807 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 A0A0G2JMZ2 1700 aa27.67■■■□□ 2.02
CLIC3-203ENST00000494426 FMNL1O95466 1100 aaPredicted RBP27.66■■■□□ 2.02
CLIC3-203ENST00000494426 GPRC5AQ8NFJ5 357 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 ZKSCAN3Q9BRR0 538 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 PAGR1Q9BTK6 254 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 ANO2Q9NQ90 1003 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 FBXO28Q9NVF7 368 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 BTBD7Q9P203 1132 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 RABGAP1Q9Y3P9 1069 aa27.66■■■□□ 2.02
CLIC3-203ENST00000494426 FLOT1O75955 427 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 NT5C2P49902 561 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 FCGRTP55899 365 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 ERVK-9P63128 1117 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 ERVK-24P63145 666 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 SLFN13Q68D06 897 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 CASC1Q6TDU7 716 aa27.65■■■□□ 2.02
CLIC3-203ENST00000494426 STOX1Q6ZVD7 989 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms