RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 MYH1P12882 1939 aa7.75□□□□□ -1.17
FNDC3B-212ENST00000494000 TSPY2A6NKD2 308 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 RANBP6O60518 1105 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 MBD3O95983 291 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 VIL1P09327 827 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 IARSP41252 1262 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 GNAQP50148 359 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 SEC23AQ15436 765 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 LONRF1Q17RB8 773 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 IFIT1BQ5T764 474 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 CERS5Q8N5B7 392 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 SGIP1Q9BQI5 828 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 LARP6Q9BRS8 491 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 IDI2Q9BXS1 227 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 PDGFDQ9GZP0 370 aaPredicted RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 EHD4Q9H223 541 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 USP40Q9NVE5 1235 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 ZNRF3Q9ULT6 936 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 TNKSO95271 1327 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 FER1L6Q2WGJ9 1857 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 hCG_2014768A0A024R1R8 64 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 ENTPD3O75355 529 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 IFNAR1P17181 557 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 KIF5BP33176 963 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 TNIP1Q15025 636 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 GRIK5Q16478 980 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 RSBN1LQ6PCB5 846 aaPredicted RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 CHST3Q7LGC8 479 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 C1orf131Q8NDD1 294 aaKnown RBP7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 TAOK3Q9H2K8 898 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 HPS5Q9UPZ3 1129 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 ARFGEF1Q9Y6D6 1849 aa7.74□□□□□ -1.17
FNDC3B-212ENST00000494000 PLIN4Q96Q06 1357 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 USP17L8P0C7I0 530 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 RPS12P25398 132 aaKnown RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 MLLT3P42568 568 aaPredicted RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 CCT2P78371 535 aaKnown RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 SSRP1Q08945 709 aaKnown RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 RTN1Q16799 776 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 PUS10Q3MIT2 529 aaKnown RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 OLFM4Q6UX06 510 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 PARP9Q8IXQ6 854 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 ZNF654Q8IZM8 581 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 OGFOD1Q8N543 542 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 MTMR14Q8NCE2 650 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 CCDC17Q96LX7 622 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 LZTS2Q9BRK4 669 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 TMOD2Q9NZR1 351 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 VPS37CA5D8V6 355 aaPredicted RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 HOXA2O43364 376 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 NAT2P11245 290 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 XBP1P17861 261 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 RRM1P23921 792 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 KRT85P78386 507 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 TRIM29Q14134 588 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 PTPROQ16827 1216 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 FKBP1CQ5VVH2 108 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 APOBEC3HQ6NTF7 200 aaKnown RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 MAPKAPK5Q8IW41 473 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 FANCBQ8NB91 859 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 SCAND2PQ9GZW5 306 aaPredicted RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 SPON1Q9HCB6 807 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 ZNF219Q9P2Y4 722 aaPredicted RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 ORC3Q9UBD5 711 aaPredicted RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 CFAP45Q9UL16 551 aa7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 ISY1Q9ULR0 285 aaKnown RBP7.73□□□□□ -1.17
FNDC3B-212ENST00000494000 FMNL1O95466 1100 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 CTDNEP1O95476 244 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 TSPY3P0CV98 308 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 TSPY8P0CW00 308 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 TGFB3P10600 412 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 AKAP17AQ02040 695 aaKnown RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 COL9A3Q14050 684 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 KLHL40Q2TBA0 621 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 WDR78Q5VTH9 848 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 MCTP1Q6DN14 999 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 CDC42EP5Q6NZY7 148 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 BRAPQ7Z569 592 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 SLC51AQ86UW1 340 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 FOXP4Q8IVH2 680 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 ENAHQ8N8S7 591 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 NEDD1Q8NHV4 660 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 CTCFLQ8NI51 663 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 C8orf76Q96K31 380 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 ZNF396Q96N95 335 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 RNF26Q9BY78 433 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 OSBPL5Q9H0X9 879 aaPredicted RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 DYTNA2CJ06 578 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 DEXIO95424 95 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 SMARCA1P28370 1054 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 CDK8P49336 464 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 TFAP4Q01664 338 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 PKP1Q13835 747 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 TSR1Q2NL82 804 aaKnown RBP7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 CACTIN-AS1Q8N1I8 211 aa7.72□□□□□ -1.17
FNDC3B-212ENST00000494000 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms