RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TANGO6Q9C0B7 1094 aa21.02■□□□□ 0.96
COL9A1-210ENST00000493682 UBE2OQ9C0C9 1292 aaKnown RBP21.02■□□□□ 0.96
COL9A1-210ENST00000493682 BCL11AQ9H165 835 aa21.02■□□□□ 0.96
COL9A1-210ENST00000493682 HOXC10Q9NYD6 342 aa21.02■□□□□ 0.96
COL9A1-210ENST00000493682 DDX20Q9UHI6 824 aaKnown RBP21.02■□□□□ 0.96
COL9A1-210ENST00000493682 HMMRO75330 724 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 CNGA1P29973 690 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 CYP2C19P33261 490 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 LRIT3Q3SXY7 679 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 KIAA1755Q5JYT7 1200 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 GPR153Q6NV75 609 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 TMEM179Q6ZVK1 233 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 MOV10L1Q9BXT6 1211 aaKnown RBP21.01■□□□□ 0.95
COL9A1-210ENST00000493682 ARMT1Q9H993 441 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 ZBTB40Q9NUA8 1239 aa21.01■□□□□ 0.95
COL9A1-210ENST00000493682 FRMPD3Q5JV73 1810 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 MSCO60682 206 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 IGHA2P01877 340 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 SLFNL1Q499Z3 407 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 TRPV1Q8NER1 839 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 DYNLL2Q96FJ2 89 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 SWAP70Q9UH65 585 aa21■□□□□ 0.95
COL9A1-210ENST00000493682 PRKAB2O43741 272 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 RAB11FIP3O75154 756 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 ADD2P35612 726 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 DPP9Q86TI2 863 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 SIAH1Q8IUQ4 282 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 SLC17A8Q8NDX2 589 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 LPAR1Q92633 364 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 SENP6Q9GZR1 1112 aaPredicted RBP20.99■□□□□ 0.95
COL9A1-210ENST00000493682 SPATC1LQ9H0A9 340 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 BOLA2Q9H3K6 86 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 PAG1Q9NWQ8 432 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 DDX19BQ9UMR2 479 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 COG6Q9Y2V7 657 aa20.99■□□□□ 0.95
COL9A1-210ENST00000493682 STRNO43815 780 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 MBD4O95243 580 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 AKR1B1P15121 316 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 ADORA2AP29274 412 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 CLEC10AQ8IUN9 316 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 DEFB123Q8N688 67 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 SHCBP1Q8NEM2 672 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 ATP8A2Q9NTI2 1148 aa20.98■□□□□ 0.95
COL9A1-210ENST00000493682 CYBAP13498 195 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 ATP5JP18859 108 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 ERCC3P19447 782 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 MDM2Q00987 491 aaPredicted RBP20.97■□□□□ 0.95
COL9A1-210ENST00000493682 OLFML2BQ68BL8 750 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 MB21D1Q8N884 522 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 ARHGEF10LQ9HCE6 1279 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 TMX2Q9Y320 296 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 ZNF236Q9UL36 1845 aa20.97■□□□□ 0.95
COL9A1-210ENST00000493682 RLFQ13129 1914 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 A0A0G2JMZ2 1700 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 SMIM22K7EJ46 135 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 DNM1LO00429 736 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 DSG3P32926 999 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 ICA1Q05084 483 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 DIEXFQ68CQ4 756 aaKnown RBP20.96■□□□□ 0.95
COL9A1-210ENST00000493682 Q7L0L9 218 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 SPICE1Q8N0Z3 855 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 HAUS7Q99871 368 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL9A1-210ENST00000493682 COL6A3P12111 3177 aa20.96■□□□□ 0.95
COL9A1-210ENST00000493682 CYP2D7A0A087X1C5 515 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 COBLO75128 1261 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 FLOT1O75955 427 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 CHGBP05060 677 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 ATN1P54259 1190 aaPredicted RBP20.95■□□□□ 0.94
COL9A1-210ENST00000493682 PLS1Q14651 629 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 C12orf60Q5U649 245 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 ATG4CQ96DT6 458 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 CCDC17Q96LX7 622 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 MROH8Q9H579 483 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 SH2D4AQ9H788 454 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 VCPKMTQ9H867 229 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 DNAH12Q6ZR08 3092 aa20.95■□□□□ 0.94
COL9A1-210ENST00000493682 USP17L12C9JPN9 530 aa20.94■□□□□ 0.94
COL9A1-210ENST00000493682 USP17L21D6R901 530 aa20.94■□□□□ 0.94
COL9A1-210ENST00000493682 CDK8P49336 464 aa20.94■□□□□ 0.94
COL9A1-210ENST00000493682 NCAPG2Q86XI2 1143 aa20.94■□□□□ 0.94
COL9A1-210ENST00000493682 UBE3CQ15386 1083 aa20.93■□□□□ 0.94
COL9A1-210ENST00000493682 GJC2Q5T442 439 aaPredicted RBP20.93■□□□□ 0.94
COL9A1-210ENST00000493682 ABRAQ8N0Z2 381 aa20.93■□□□□ 0.94
COL9A1-210ENST00000493682 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
COL9A1-210ENST00000493682 BAZ2AQ9UIF9 1905 aaKnown RBP20.92■□□□□ 0.94
COL9A1-210ENST00000493682 WDR46O15213 610 aaKnown RBP20.92■□□□□ 0.94
COL9A1-210ENST00000493682 SEPT4O43236 478 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 RTP1P59025 263 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 ANO1Q5XXA6 986 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 SAMD1Q6SPF0 538 aaPredicted RBP20.92■□□□□ 0.94
COL9A1-210ENST00000493682 C16orf86Q6ZW13 317 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 AMOTL1Q8IY63 956 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 ARRDC4Q8NCT1 418 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 LBHD1Q9BQE6 289 aaPredicted RBP20.92■□□□□ 0.94
COL9A1-210ENST00000493682 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
COL9A1-210ENST00000493682 MTMR10Q9NXD2 777 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 MYH8P13535 1937 aa20.92■□□□□ 0.94
COL9A1-210ENST00000493682 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
COL9A1-210ENST00000493682 TMEM132BQ14DG7 1078 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms