RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 PTPAQ15257 358 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 CAMK4Q16566 473 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 KIAA0825Q8IV33 1275 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 PPP1R9BQ96SB3 815 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 VPS33BQ9H267 617 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 SERPINB13Q9UIV8 391 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 STX8Q9UNK0 236 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 KIF13BQ9NQT8 1826 aa16.18■□□□□ 0.18
PTPN7-216ENST00000492977 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 TOP1P11387 765 aaKnown RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 SCG2P13521 617 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 KCNA3P22001 575 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 CMA1P23946 247 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 KRT2P35908 639 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 NUBP1P53384 320 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 AXDND1Q5T1B0 1012 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 BRMS1Q9HCU9 246 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 VPS54Q9P1Q0 977 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 MAD2L2Q9UI95 211 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 PALM3A6NDB9 673 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 DPEP1P16444 411 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 FMR1NBQ8N0W7 255 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 RNF214Q8ND24 703 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 IDI2Q9BXS1 227 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 EHD4Q9H223 541 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
PTPN7-216ENST00000492977 SH3GLB2Q9NR46 395 aa16.17■□□□□ 0.18
PTPN7-216ENST00000492977 ADAMTSL1Q8N6G6 1762 aa16.16■□□□□ 0.18
PTPN7-216ENST00000492977 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
PTPN7-216ENST00000492977 TOB1P50616 345 aaPredicted RBP16.16■□□□□ 0.18
PTPN7-216ENST00000492977 NR5A1Q13285 461 aa16.16■□□□□ 0.18
PTPN7-216ENST00000492977 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
PTPN7-216ENST00000492977 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
PTPN7-216ENST00000492977 SHISA4Q96DD7 197 aa16.16■□□□□ 0.18
PTPN7-216ENST00000492977 CEP95Q96GE4 821 aa16.16■□□□□ 0.18
PTPN7-216ENST00000492977 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 CUTAO60888 179 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 SMARCA1P28370 1054 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 RBM5P52756 815 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPN7-216ENST00000492977 TGFB2P61812 414 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 TYRO3Q06418 890 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 PPP4R3BQ5MIZ7 849 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 STAG2Q8N3U4 1231 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 MTMR4Q9NYA4 1195 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 CEP131Q9UPN4 1083 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 MORC2Q9Y6X9 1032 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-216ENST00000492977 PSME4Q14997 1843 aa16.15■□□□□ 0.18
PTPN7-216ENST00000492977 MYH8P13535 1937 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 IGKV6D-41A0A0C4DH26 115 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 A0A1B0GVL5 298 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 CALML3P27482 149 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 MARCKSP29966 332 aaPredicted RBP16.14■□□□□ 0.17
PTPN7-216ENST00000492977 NDUFA8P51970 172 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 NFIAQ12857 509 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 CCDC17Q96LX7 622 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 SPZ1Q9BXG8 430 aa16.14■□□□□ 0.17
PTPN7-216ENST00000492977 FAM237AA0A1B0GTK4 181 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 CAVIN2O95810 425 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
PTPN7-216ENST00000492977 SHMT1P34896 483 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 NPY5RQ15761 445 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
PTPN7-216ENST00000492977 PDLIM2Q96JY6 352 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 AKR1B1P15121 316 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 NLRP5P59047 1200 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 LARGE2Q8N3Y3 721 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-216ENST00000492977 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 PIM2Q9P1W9 311 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
PTPN7-216ENST00000492977 MRVI1Q9Y6F6 885 aa16.13■□□□□ 0.17
PTPN7-216ENST00000492977 BAZ2BQ9UIF8 2168 aaKnown RBP16.13■□□□□ 0.17
PTPN7-216ENST00000492977 TRIM75PA6NK02 468 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 ZNF202O95125 648 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 TTLL1O95922 423 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 BMP15O95972 392 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 VIL1P09327 827 aaKnown RBP16.12■□□□□ 0.17
PTPN7-216ENST00000492977 PFKFB1P16118 471 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 POLD1P28340 1107 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 RESP18Q5W5W9 173 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 GALNT17Q6IS24 598 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 RSBN1LQ6PCB5 846 aaPredicted RBP16.12■□□□□ 0.17
PTPN7-216ENST00000492977 FOXP4Q8IVH2 680 aaPredicted RBP16.12■□□□□ 0.17
PTPN7-216ENST00000492977 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 SDF4Q9BRK5 362 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 FAM198AQ9UFP1 575 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 PCDHAC2Q9Y5I4 1007 aa16.12■□□□□ 0.17
PTPN7-216ENST00000492977 CYTH3O43739 400 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 ENTPD3O75355 529 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 PTPREP23469 700 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms