RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 DPP9Q86TI2 863 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 DDX4Q9NQI0 724 aaKnown RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 TAF6LQ9Y6J9 622 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 LRRC37A3O60309 1634 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 NWD2Q9ULI1 1742 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 CHMP2AO43633 222 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 EGFRP00533 1210 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 MCM7P33993 719 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 MAP3K9P80192 1104 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 PABPC4Q13310 644 aaKnown RBP eCLIP5.13□□□□□ -1.597e-8■□□□□ 9.8
TRA2B-215ENST00000492417 KIF22Q14807 665 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 NOM1Q5C9Z4 860 aaKnown RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 APOBEC3HQ6NTF7 200 aaKnown RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 CYB5R4Q7L1T6 521 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 CCDC148Q8NFR7 591 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 COA7Q96BR5 231 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 PGBD1Q96JS3 809 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 ZDHHC15Q96MV8 337 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 PLIN2Q99541 437 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 RTFDC1Q9BY42 306 aaPredicted RBP5.13□□□□□ -1.59
TRA2B-215ENST00000492417 TPCN1Q9ULQ1 816 aa5.13□□□□□ -1.59
TRA2B-215ENST00000492417 F5H6K3 240 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 FMR1Q06787 632 aaKnown RBP eCLIP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 KLRC3Q07444 240 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 PIK3AP1Q6ZUJ8 805 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 DPF2Q92785 391 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 TMEM47Q9BQJ4 181 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 EHMT1Q9H9B1 1298 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 PCDHA1Q9Y5I3 950 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 CICQ96RK0 1608 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 FAM205AQ6ZU69 1335 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 ENTPD3O75355 529 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RBM25P49756 843 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 MRPL12P52815 198 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 NECTIN1Q15223 517 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 TAF1CQ15572 869 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 ZNF174Q15697 407 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 JMYQ8N9B5 988 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RASGRP4Q8TDF6 673 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 PIGSQ96S52 555 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RBM28Q9NW13 759 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 COL22A1Q8NFW1 1626 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 CCL15-CCL14A0A0B4J2E2 113 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 TESPA1A2RU30 521 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 SMCO2A6NFE2 343 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 BECN2A8MW95 431 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 GOLGA6L19H0YKK7 550 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 BACH1O14867 736 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 POTEIP0CG38 1075 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 POTEJP0CG39 1038 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 OSBPP22059 807 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 GNA11P29992 359 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 ECE1P42892 770 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 USP14P54578 494 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 EVX2Q03828 476 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 CCL15Q16663 113 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 APOA5Q6Q788 366 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 FBXO11Q86XK2 927 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 ACER1Q8TDN7 264 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 CCDC47Q96A33 483 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 ZNF512BQ96KM6 892 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RAVER2Q9HCJ3 691 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RTEL1Q9NZ71 1219 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 HERC5Q9UII4 1024 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 CIZ1Q9ULV3 898 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 GINS2Q9Y248 185 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 BTAF1O14981 1849 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 KINO60870 393 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 KCNA3P22001 575 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 STAT2P52630 851 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 TTBK2Q6IQ55 1244 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 CDAN1Q8IWY9 1227 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 ANKRD13AQ8IZ07 590 aa5.12□□□□□ -1.59
TRA2B-215ENST00000492417 MPHOSPH6Q99547 160 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RIOK1Q9BRS2 568 aaKnown RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 TAF1DQ9H5J8 278 aaPredicted RBP5.12□□□□□ -1.59
TRA2B-215ENST00000492417 RIC1Q4ADV7 1423 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 PLEKHA8P1O95397 391 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 BAG4O95429 457 aaKnown RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 HDLBPQ00341 1268 aaKnown RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 TRAF1Q13077 416 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 KCTD2Q14681 263 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 STOX1Q6ZVD7 989 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 DIS3L2Q8IYB7 885 aaKnown RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 CDCA5Q96FF9 252 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 AIFM3Q96NN9 605 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 ZSWIM6Q9HCJ5 1215 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 GJB4Q9NTQ9 266 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 CCDC39Q9UFE4 941 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 SCN11AQ9UI33 1791 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 BAZ2BQ9UIF8 2168 aaKnown RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 DEXIO95424 95 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 TPM3P06753 285 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 IDEP14735 1019 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 PDIA3P30101 505 aaKnown RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 HOXA13P31271 388 aaPredicted RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 KRT2P35908 639 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 CAMK4Q16566 473 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 SPDYE2Q495Y8 402 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 CAVIN1Q6NZI2 390 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms