RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 USP17L20D6RJB6 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 PCP11498 1178 aaKnown RBP30.56■■■□□ 2.48
TTC3-223ENST00000492275 IRX3P78415 501 aaPredicted RBP30.56■■■□□ 2.48
TTC3-223ENST00000492275 USP17L24Q0WX57 530 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 IMMTQ16891 758 aaKnown RBP30.56■■■□□ 2.48
TTC3-223ENST00000492275 MKL1Q969V6 931 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 ERO1AQ96HE7 468 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 RPAP3Q9H6T3 665 aaPredicted RBP30.56■■■□□ 2.48
TTC3-223ENST00000492275 TOMM22Q9NS69 142 aa30.56■■■□□ 2.48
TTC3-223ENST00000492275 CTU1Q7Z7A3 348 aaKnown RBP30.55■■■□□ 2.48
TTC3-223ENST00000492275 SPICE1Q8N0Z3 855 aa30.55■■■□□ 2.48
TTC3-223ENST00000492275 LPAR1Q92633 364 aa30.55■■■□□ 2.48
TTC3-223ENST00000492275 MAP4K1Q92918 833 aa30.55■■■□□ 2.48
TTC3-223ENST00000492275 RNF41Q9H4P4 317 aaPredicted RBP30.55■■■□□ 2.48
TTC3-223ENST00000492275 RLFQ13129 1914 aa30.55■■■□□ 2.48
TTC3-223ENST00000492275 NEDD4P46934 1319 aa30.54■■■□□ 2.48
TTC3-223ENST00000492275 NMT2O60551 498 aa30.54■■■□□ 2.48
TTC3-223ENST00000492275 CDC45O75419 566 aa30.54■■■□□ 2.48
TTC3-223ENST00000492275 LACTBP83111 547 aaPredicted RBP30.54■■■□□ 2.48
TTC3-223ENST00000492275 POTEEQ6S8J3 1075 aa30.54■■■□□ 2.48
TTC3-223ENST00000492275 U3KPZ7 1027 aaPredicted RBP30.54■■■□□ 2.48
TTC3-223ENST00000492275 MGAMO43451 1857 aa30.53■■■□□ 2.48
TTC3-223ENST00000492275 TTLL1O95922 423 aa30.53■■■□□ 2.48
TTC3-223ENST00000492275 GCLCP48506 637 aaPredicted RBP30.53■■■□□ 2.48
TTC3-223ENST00000492275 HERVK_113P62684 666 aa30.53■■■□□ 2.48
TTC3-223ENST00000492275 ANKRD13CQ8N6S4 541 aa30.53■■■□□ 2.48
TTC3-223ENST00000492275 ARHGAP39Q9C0H5 1083 aa30.53■■■□□ 2.48
TTC3-223ENST00000492275 LSG1Q9H089 658 aaKnown RBP30.53■■■□□ 2.48
TTC3-223ENST00000492275 CTGFP29279 349 aa30.52■■■□□ 2.48
TTC3-223ENST00000492275 NOVP48745 357 aa30.52■■■□□ 2.48
TTC3-223ENST00000492275 GOPCQ9HD26 462 aa30.52■■■□□ 2.48
TTC3-223ENST00000492275 PARP14Q460N5 1801 aa30.52■■■□□ 2.48
TTC3-223ENST00000492275 F5H6K3 240 aa30.51■■■□□ 2.47
TTC3-223ENST00000492275 KLRC3Q07444 240 aa30.51■■■□□ 2.47
TTC3-223ENST00000492275 KIAA1211Q6ZU35 1233 aa30.51■■■□□ 2.47
TTC3-223ENST00000492275 TNS4Q8IZW8 715 aa30.51■■■□□ 2.47
TTC3-223ENST00000492275 TCP11L1Q9NUJ3 509 aa30.51■■■□□ 2.47
TTC3-223ENST00000492275 PEX10O60683 326 aa30.5■■■□□ 2.47
TTC3-223ENST00000492275 CYP21A2P08686 494 aa30.5■■■□□ 2.47
TTC3-223ENST00000492275 OTOP1Q7RTM1 612 aa30.5■■■□□ 2.47
TTC3-223ENST00000492275 LRRC47Q8N1G4 583 aaKnown RBP30.5■■■□□ 2.47
TTC3-223ENST00000492275 MCOLN1Q9GZU1 580 aa30.5■■■□□ 2.47
TTC3-223ENST00000492275 RBPJLQ9UBG7 517 aa30.5■■■□□ 2.47
TTC3-223ENST00000492275 TRIM17Q9Y577 477 aa30.5■■■□□ 2.47
TTC3-223ENST00000492275 RBM8AQ9Y5S9 174 aaKnown RBP30.5■■■□□ 2.47
TTC3-223ENST00000492275 WDR46O15213 610 aaKnown RBP30.49■■■□□ 2.47
TTC3-223ENST00000492275 ECM2O94769 699 aaPredicted RBP30.49■■■□□ 2.47
TTC3-223ENST00000492275 FAM110CQ1W6H9 321 aa30.49■■■□□ 2.47
TTC3-223ENST00000492275 TXNRD2Q9NNW7 524 aa30.49■■■□□ 2.47
TTC3-223ENST00000492275 MORF4L1Q9UBU8 362 aa30.49■■■□□ 2.47
TTC3-223ENST00000492275 SYNPO2Q9UMS6 1093 aa30.49■■■□□ 2.47
TTC3-223ENST00000492275 DOCK3Q8IZD9 2030 aa30.49■■■□□ 2.47
TTC3-223ENST00000492275 NDUFB10O96000 172 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 COG2Q14746 738 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 CASC1Q6TDU7 716 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 ESR2Q92731 530 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 TANGO6Q9C0B7 1094 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 EFCC1Q9HA90 598 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 TAF6LQ9Y6J9 622 aa30.48■■■□□ 2.47
TTC3-223ENST00000492275 B4E1Z4 1266 aa30.47■■■□□ 2.47
TTC3-223ENST00000492275 RAD21O60216 631 aa30.47■■■□□ 2.47
TTC3-223ENST00000492275 KIF22Q14807 665 aa30.47■■■□□ 2.47
TTC3-223ENST00000492275 PPP4R3BQ5MIZ7 849 aa30.47■■■□□ 2.47
TTC3-223ENST00000492275 STX8Q9UNK0 236 aa30.47■■■□□ 2.47
TTC3-223ENST00000492275 SPDYE16A6NNV3 312 aaPredicted RBP30.46■■■□□ 2.47
TTC3-223ENST00000492275 KDM4AO75164 1064 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 PSMC4P43686 418 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 FAM83BQ5T0W9 1011 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 LBX2Q6XYB7 198 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 GMCL1P1Q8NEA9 526 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 TRIM47Q96LD4 638 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 NUP88Q99567 741 aaPredicted RBP30.46■■■□□ 2.47
TTC3-223ENST00000492275 ANO2Q9NQ90 1003 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 ZSWIM5Q9P217 1185 aa30.46■■■□□ 2.47
TTC3-223ENST00000492275 CNMDO75829 334 aa30.45■■■□□ 2.47
TTC3-223ENST00000492275 NT5C2P49902 561 aa30.45■■■□□ 2.47
TTC3-223ENST00000492275 PKN2Q16513 984 aaKnown RBP30.45■■■□□ 2.47
TTC3-223ENST00000492275 Q3C1V9 767 aa30.45■■■□□ 2.47
TTC3-223ENST00000492275 GTF3C2Q8WUA4 911 aaPredicted RBP30.45■■■□□ 2.47
TTC3-223ENST00000492275 HOXC10Q9NYD6 342 aa30.45■■■□□ 2.47
TTC3-223ENST00000492275 FLOT1O75955 427 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 DSG3P32926 999 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 ARHGEF6Q15052 776 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 SLFN13Q68D06 897 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 RCSD1Q6JBY9 416 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 ZKSCAN3Q9BRR0 538 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 KRT23Q9C075 422 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 CNNM2Q9H8M5 875 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 FBXO28Q9NVF7 368 aa30.44■■■□□ 2.46
TTC3-223ENST00000492275 GPRC5AQ8NFJ5 357 aa30.43■■■□□ 2.46
TTC3-223ENST00000492275 TMEM47Q9BQJ4 181 aa30.43■■■□□ 2.46
TTC3-223ENST00000492275 PAGR1Q9BTK6 254 aa30.43■■■□□ 2.46
TTC3-223ENST00000492275 BTBD7Q9P203 1132 aa30.43■■■□□ 2.46
TTC3-223ENST00000492275 RABGAP1Q9Y3P9 1069 aa30.43■■■□□ 2.46
TTC3-223ENST00000492275 E7EWF7 191 aa30.42■■■□□ 2.46
TTC3-223ENST00000492275 FMNL1O95466 1100 aaPredicted RBP30.42■■■□□ 2.46
TTC3-223ENST00000492275 FCGRTP55899 365 aa30.42■■■□□ 2.46
TTC3-223ENST00000492275 ERVK-9P63128 1117 aa30.42■■■□□ 2.46
TTC3-223ENST00000492275 ERVK-24P63145 666 aa30.42■■■□□ 2.46
TTC3-223ENST00000492275 NECTIN1Q15223 517 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms