RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 USP17L13C9JLJ4 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L11C9JVI0 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L18D6R9N7 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L22D6RA61 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L17D6RBQ6 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L19D6RCP7 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L20D6RJB6 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 TSPY3P0CV98 308 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 TSPY8P0CW00 308 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 OSBPP22059 807 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 HERVK_113P62684 666 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L24Q0WX57 530 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 OTOP1Q7RTM1 612 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 SPICE1Q8N0Z3 855 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 ERO1AQ96HE7 468 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 MCOLN1Q9GZU1 580 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 RBPJLQ9UBG7 517 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 PARP14Q460N5 1801 aa18■□□□□ 0.47
SS18L1-204ENST00000491916 CNMDO75829 334 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 CYP21A2P08686 494 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 PCP11498 1178 aaKnown RBP17.99■□□□□ 0.47
SS18L1-204ENST00000491916 MFSD6Q6ZSS7 791 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 LPAR1Q92633 364 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 TCP11L1Q9NUJ3 509 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 CTNNA3Q9UI47 895 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 DOCK3Q8IZD9 2030 aa17.99■□□□□ 0.47
SS18L1-204ENST00000491916 TSPY2A6NKD2 308 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 SPDYE16A6NNV3 312 aaPredicted RBP17.98■□□□□ 0.47
SS18L1-204ENST00000491916 RANBP6O60518 1105 aaKnown RBP17.98■□□□□ 0.47
SS18L1-204ENST00000491916 TTLL1O95922 423 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 IRX3P78415 501 aaPredicted RBP17.98■□□□□ 0.47
SS18L1-204ENST00000491916 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 FAM110CQ1W6H9 321 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 Q3C1V9 767 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 SMCR8Q8TEV9 937 aaPredicted RBP17.98■□□□□ 0.47
SS18L1-204ENST00000491916 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 SH2D4AQ9H788 454 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 BRCA2P51587 3418 aa17.98■□□□□ 0.47
SS18L1-204ENST00000491916 MGAMO43451 1857 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 F5H6K3 240 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 CDC45O75419 566 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 NDUFB10O96000 172 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 GCLCP48506 637 aaPredicted RBP17.97■□□□□ 0.47
SS18L1-204ENST00000491916 KLRC3Q07444 240 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 IMMTQ16891 758 aaKnown RBP17.97■□□□□ 0.47
SS18L1-204ENST00000491916 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
SS18L1-204ENST00000491916 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 TNS4Q8IZW8 715 aa17.97■□□□□ 0.47
SS18L1-204ENST00000491916 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
SS18L1-204ENST00000491916 WDR46O15213 610 aaKnown RBP17.96■□□□□ 0.47
SS18L1-204ENST00000491916 STOX1Q6ZVD7 989 aa17.96■□□□□ 0.47
SS18L1-204ENST00000491916 LRRC47Q8N1G4 583 aaKnown RBP17.96■□□□□ 0.47
SS18L1-204ENST00000491916 GMCL1P1Q8NEA9 526 aa17.96■□□□□ 0.47
SS18L1-204ENST00000491916 NUP88Q99567 741 aaPredicted RBP17.96■□□□□ 0.47
SS18L1-204ENST00000491916 RNF41Q9H4P4 317 aaPredicted RBP17.96■□□□□ 0.47
SS18L1-204ENST00000491916 BTBD7Q9P203 1132 aa17.96■□□□□ 0.47
SS18L1-204ENST00000491916 ZSWIM5Q9P217 1185 aa17.96■□□□□ 0.47
SS18L1-204ENST00000491916 TRIM17Q9Y577 477 aa17.96■□□□□ 0.47
SS18L1-204ENST00000491916 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
SS18L1-204ENST00000491916 A0A0G2JMZ2 1700 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 B4E1Z4 1266 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 PSMC4P43686 418 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 COL9A3Q14050 684 aaPredicted RBP17.95■□□□□ 0.46
SS18L1-204ENST00000491916 COG2Q14746 738 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 FAM83BQ5T0W9 1011 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 EFCC1Q9HA90 598 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 TOMM22Q9NS69 142 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 FBXO28Q9NVF7 368 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 ADAMTS5Q9UNA0 930 aa17.95■□□□□ 0.46
SS18L1-204ENST00000491916 KDM4AO75164 1064 aa17.94■□□□□ 0.46
SS18L1-204ENST00000491916 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
SS18L1-204ENST00000491916 DSG3P32926 999 aa17.94■□□□□ 0.46
SS18L1-204ENST00000491916 PKN2Q16513 984 aaKnown RBP17.94■□□□□ 0.46
SS18L1-204ENST00000491916 RASGRP2Q7LDG7 609 aa17.94■□□□□ 0.46
SS18L1-204ENST00000491916 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
SS18L1-204ENST00000491916 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
SS18L1-204ENST00000491916 RABGAP1Q9Y3P9 1069 aa17.94■□□□□ 0.46
SS18L1-204ENST00000491916 ERVK-9P63128 1117 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 ERVK-24P63145 666 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 FBXO46Q6PJ61 603 aaPredicted RBP17.93■□□□□ 0.46
SS18L1-204ENST00000491916 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 GTF3C2Q8WUA4 911 aaPredicted RBP17.93■□□□□ 0.46
SS18L1-204ENST00000491916 ANKS1AQ92625 1134 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 ESR2Q92731 530 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 ATG4CQ96DT6 458 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 TMEM47Q9BQJ4 181 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 ZKSCAN3Q9BRR0 538 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 HOXC10Q9NYD6 342 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
SS18L1-204ENST00000491916 E7EWF7 191 aa17.92■□□□□ 0.46
SS18L1-204ENST00000491916 FLOT1O75955 427 aa17.92■□□□□ 0.46
SS18L1-204ENST00000491916 NT5C2P49902 561 aa17.92■□□□□ 0.46
SS18L1-204ENST00000491916 SLFN13Q68D06 897 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms