RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 CYP2B6P20813 491 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 ERVK-9P63128 1117 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 ERVK-24P63145 666 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 Q3C1V9 767 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 C12orf60Q5U649 245 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 WDR78Q5VTH9 848 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CDK9-204ENST00000491521 PXYLP1Q8TE99 480 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 C12orf42Q96LP6 360 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 PORCNQ9H237 461 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 A0A1W2PRG0 241 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 SLC34A2O95436 690 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 GJB1P08034 283 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 CDK8P49336 464 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
CDK9-204ENST00000491521 CTR9Q6PD62 1173 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 POTEEQ6S8J3 1075 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 TMEM179Q6ZVK1 233 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 NKX2-3Q8TAU0 364 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
CDK9-204ENST00000491521 OSBP2Q969R2 916 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 DEFB118Q96PH6 123 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
CDK9-204ENST00000491521 BACH2Q9BYV9 841 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 GJD2Q9UKL4 321 aa16.22■□□□□ 0.19
CDK9-204ENST00000491521 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 M0R2C6 588 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 SGSM2O43147 1006 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 RAD21O60216 631 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 TFRCP02786 760 aaKnown RBP16.21■□□□□ 0.19
CDK9-204ENST00000491521 MAPK4P31152 587 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 GJA8P48165 433 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 ICA1Q05084 483 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 TRIM32Q13049 653 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 CCDC129Q6ZRS4 1044 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 SPICE1Q8N0Z3 855 aa16.21■□□□□ 0.19
CDK9-204ENST00000491521 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
CDK9-204ENST00000491521 CNMDO75829 334 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 HMGCRP04035 888 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 APPP05067 770 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 KIAA1755Q5JYT7 1200 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 C16orf86Q6ZW13 317 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 NUDT12Q9BQG2 462 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 ARHGEF10LQ9HCE6 1279 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
CDK9-204ENST00000491521 RAD50Q92878 1312 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 GPAA1O43292 621 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
CDK9-204ENST00000491521 REC8O95072 547 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 SEC24BO95487 1268 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 TDO2P48775 406 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 GPR142Q7Z601 462 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 DPF3Q92784 378 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDK9-204ENST00000491521 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
CDK9-204ENST00000491521 BTBD7Q9P203 1132 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 ARPP21Q9UBL0 812 aaPredicted RBP16.19■□□□□ 0.18
CDK9-204ENST00000491521 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
CDK9-204ENST00000491521 SPDYE16A6NNV3 312 aaPredicted RBP16.18■□□□□ 0.18
CDK9-204ENST00000491521 GSG1L2A8MUP6 293 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 SGPL1O95470 568 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 CCNA1P78396 465 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 ZNF589Q86UQ0 364 aaPredicted RBP16.18■□□□□ 0.18
CDK9-204ENST00000491521 SOCS4Q8WXH5 440 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 TRIB2Q92519 343 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 CCDC17Q96LX7 622 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 IL25Q9H293 177 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 MKNK2Q9HBH9 465 aa16.18■□□□□ 0.18
CDK9-204ENST00000491521 EEF2P13639 858 aaKnown RBP16.17■□□□□ 0.18
CDK9-204ENST00000491521 ZKSCAN1P17029 563 aaPredicted RBP16.17■□□□□ 0.18
CDK9-204ENST00000491521 PLS1Q14651 629 aa16.17■□□□□ 0.18
CDK9-204ENST00000491521 CCL14Q16627 93 aa16.17■□□□□ 0.18
CDK9-204ENST00000491521 SIAH1Q8IUQ4 282 aa16.17■□□□□ 0.18
CDK9-204ENST00000491521 EPB41L4AQ9HCS5 686 aaPredicted RBP16.17■□□□□ 0.18
CDK9-204ENST00000491521 FLOT1O75955 427 aa16.16■□□□□ 0.18
CDK9-204ENST00000491521 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
CDK9-204ENST00000491521 RGS2P41220 211 aa16.16■□□□□ 0.18
CDK9-204ENST00000491521 COG2Q14746 738 aa16.16■□□□□ 0.18
CDK9-204ENST00000491521 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
CDK9-204ENST00000491521 PAK6Q9NQU5 681 aaPredicted RBP16.16■□□□□ 0.18
CDK9-204ENST00000491521 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
CDK9-204ENST00000491521 H0YGN5 161 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 PRDM1O75626 825 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 GNAT2P19087 354 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 PTH1RQ03431 593 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 MORN1Q5T089 497 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 APBA2Q99767 749 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 KANSL2Q9H9L4 492 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 HOXC10Q9NYD6 342 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms