RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 RIOK1Q9BRS2 568 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 UBE2OQ9C0C9 1292 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 CCDC69A6NI79 296 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 IFIT3O14879 490 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 LDHCP07864 332 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 ZNF697Q5TEC3 545 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 FBXO18Q8NFZ0 1043 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 TDRD7Q8NHU6 1098 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 ESR2Q92731 530 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 CDX2Q99626 313 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 CRNKL1Q9BZJ0 848 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 NCOA5Q9HCD5 579 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 COL1A1P02452 1464 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-210ENST00000491467 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 WTAPQ15007 396 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 C7orf61Q8IZ16 206 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 PANK2Q9BZ23 570 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 RNF208Q9H0X6 261 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 SLC12A7Q9Y666 1083 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 NEDD4P46934 1319 aa13.85□□□□□ -0.19
SRGAP3-210ENST00000491467 CTAGE5O15320 804 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 KDM4AO75164 1064 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 CALM1P0DP23 149 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 CALM2P0DP24 149 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 CALM3P0DP25 149 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 CCL5P13501 91 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 MAGEA10P43363 369 aaPredicted RBP13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 MIGA1Q8NAN2 632 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 RTEL1Q9NZ71 1219 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 ANKIB1Q9P2G1 1089 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 TFIP11Q9UBB9 837 aaKnown RBP13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 FOCADQ5VW36 1801 aa13.84□□□□□ -0.19
SRGAP3-210ENST00000491467 NAV1Q8NEY1 1877 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 PRKAB2O43741 272 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 ORC4O43929 436 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 YEATS4O95619 227 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 CAVIN2O95810 425 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 ZBTB48P10074 688 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 IFNAR1P17181 557 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 SYN1P17600 705 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 MECOMQ03112 1051 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 KIF22Q14807 665 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 CCDC178Q5BJE1 867 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 SP8Q8IXZ3 490 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 UBAC1Q9BSL1 405 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 NUP62CLQ9H1M0 184 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 GPHNQ9NQX3 736 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 BIN2Q9UBW5 565 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 MYH1P12882 1939 aa13.83□□□□□ -0.2
SRGAP3-210ENST00000491467 BAG3O95817 575 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 LDHBP07195 334 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 CCDC192P0DO97 292 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 PPP4CP60510 307 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 TRIM29Q14134 588 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 NTRK3Q16288 839 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 SLF2Q8IX21 1173 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 TRIM22Q8IYM9 498 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 WNK4Q96J92 1243 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 C1QTNF1Q9BXJ1 281 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 SCN9AQ15858 1988 aa13.82□□□□□ -0.2
SRGAP3-210ENST00000491467 MINDY4BA8MYZ0 360 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 IL1R1P14778 569 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 FAM173BQ6P4H8 233 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 DZIP1Q86YF9 867 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 KCNG4Q8TDN1 519 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 MYLIPQ8WY64 445 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 PDLIM2Q96JY6 352 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms