RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	PRAMEF19	Q5SWL8	479 aa		23.51	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ZNF512B	Q96KM6	892 aa	Predicted RBP	23.51	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	SPATC1L	Q9H0A9	340 aa		23.51	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	GNAI2	P04899	355 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ERCC3	P19447	782 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ITGB8	P26012	769 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ABRA	Q8N0Z2	381 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ARHGAP45	Q92619	1136 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	CDCA7L	Q96GN5	454 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	MROH8	Q9H579	483 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	PHF24	Q9UPV7	400 aa		23.5	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	KIAA0355	O15063	1070 aa		23.49	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	FPGS	Q05932	587 aa		23.49	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	MB21D1	Q8N884	522 aa		23.49	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	RARB	P10826	455 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	DNAJB2	P25686	324 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ZAP70	P43403	619 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	EPHB4	P54760	987 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	TNNI3K	Q59H18	835 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	FAM47A	Q5JRC9	791 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	RNF180	Q86T96	592 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	DBNDD2	Q9BQY9	259 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ZNF576	Q9H609	170 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	PIH1D3	Q9NQM4	214 aa	Known RBP	23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	TMEM39A	Q9NV64	488 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	FPGT-TNNI3K	V9GXZ4	949 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	MUC3A	Q02505	3323 aa		23.48	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	PNMA6E	A0A0J9YXQ4	647 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	PLS1	Q14651	629 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	TRMT2A	Q8IZ69	625 aa	Known RBP	23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	MIGA1	Q8NAN2	632 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	USP38	Q8NB14	1042 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	TANGO6	Q9C0B7	1094 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	XPNPEP3	Q9NQH7	507 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	NRBP1	Q9UHY1	535 aa		23.47	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	FCER1A	P12319	257 aa		23.46	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	NCAPG2	Q86XI2	1143 aa		23.46	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	ATXN2L	Q8WWM7	1075 aa	Known RBP	23.46	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	MAML3	Q96JK9	1138 aa		23.46	■■□□□ 1.35
CDK5RAP2-218	ENST00000491334	FOCAD	Q5VW36	1801 aa		23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	PQBP1	O60828	265 aa	Known RBP	23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	IDH1	O75874	414 aa	Known RBP	23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	GUCY1A2	P33402	732 aa		23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	SHMT1	P34896	483 aa		23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	OS9	Q13438	667 aa	Predicted RBP	23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	SEPT2	Q15019	361 aa		23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	TIFA	Q96CG3	184 aa		23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	GAS2L1	Q99501	681 aa	Predicted RBP	23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	CDK5RAP2	Q96SN8	1893 aa		23.45	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	DCDC2C	A8MYV0	355 aa		23.44	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	TMED8	Q6PL24	325 aa	Predicted RBP	23.44	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	NCOR1	O75376	2440 aa		23.44	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	MPHOSPH10	O00566	681 aa	Known RBP	23.43	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	POLR3D	P05423	398 aa	Predicted RBP	23.43	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	DSG3	P32926	999 aa		23.43	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	PLCD1	P51178	756 aa		23.43	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	MAGEB6	Q8N7X4	407 aa		23.43	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	TOX2	Q96NM4	488 aa		23.43	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334		A0A1W2PRG0	241 aa		23.42	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	PGK1	P00558	417 aa		23.42	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	RARS	P54136	660 aa	Known RBP	23.42	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	SLC44A5	Q8NCS7	719 aa		23.42	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	PPM1E	Q8WY54	764 aa		23.42	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	MYH1	P12882	1939 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	ZNF236	Q9UL36	1845 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334		A0A1W2PQ45	241 aa	Predicted RBP	23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334		A0A1W2PQY0	241 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	IPO8	O15397	1037 aa	Known RBP	23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	SLC25A27	O95847	323 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	MAP3K12	Q12852	859 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	CCDC174	Q6PII3	467 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	ANKRD33	Q7Z3H0	272 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	NUP133	Q8WUM0	1156 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	ASB2	Q96Q27	587 aa		23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	TSEN34	Q9BSV6	310 aa	Known RBP	23.41	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	FLOT1	O75955	427 aa		23.4	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	FAAP100	Q0VG06	881 aa		23.4	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	AKNAD1	Q5T1N1	836 aa		23.4	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	TINF2	Q9BSI4	451 aa		23.4	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	SMCHD1	A6NHR9	2005 aa		23.4	■■□□□ 1.34
CDK5RAP2-218	ENST00000491334	TIMP1	P01033	207 aa		23.39	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MRPS5	P82675	430 aa	Known RBP	23.39	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	GABPA	Q06546	454 aa		23.39	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	CCDC129	Q6ZRS4	1044 aa		23.39	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	THEG	Q9P2T0	379 aa		23.39	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	DIS3	Q9Y2L1	958 aa	Known RBP	23.39	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MYO9B	Q13459	2157 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	SURF6	O75683	361 aa	Known RBP	23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	AKR1A1	P14550	325 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	POLA2	Q14181	598 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ATG4C	Q96DT6	458 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MMP19	Q99542	508 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	23.38	■■□□□ 1.33	7e-8	■■■□□ 16.2
CDK5RAP2-218	ENST00000491334	STARD7	Q9NQZ5	370 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	RAPGEFL1	Q9UHV5	662 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	BDP1	A6H8Y1	2624 aa		23.38	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	KCTD2	Q14681	263 aa		23.37	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MFSD5	Q6N075	450 aa		23.37	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TMEM179	Q6ZVK1	233 aa		23.37	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	IL27	Q8NEV9	243 aa		23.37	■■□□□ 1.33

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms