RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 COBLO75128 1261 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 IDH1O75874 414 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 TRIM27P14373 513 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 ADCYAP1R1P41586 468 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 POLA2Q14181 598 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 LRRC41Q15345 812 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 SHCBP1Q8NEM2 672 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 SPATC1LQ9H0A9 340 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
CTDSP1-210ENST00000491064 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 TMEM265A0A087WTH1 108 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 ERCC3P19447 782 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 PLCD1P51178 756 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 COG2Q14746 738 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 SEPT2Q15019 361 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 PRAMEF19Q5SWL8 479 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 MAGEB6Q8N7X4 407 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 HOXC10Q9NYD6 342 aa16.63■□□□□ 0.25
CTDSP1-210ENST00000491064 A0A1W2PRG0 241 aa16.62■□□□□ 0.25
CTDSP1-210ENST00000491064 ITGB8P26012 769 aa16.62■□□□□ 0.25
CTDSP1-210ENST00000491064 TLE2Q04725 743 aa16.62■□□□□ 0.25
CTDSP1-210ENST00000491064 FAM47AQ5JRC9 791 aa16.62■□□□□ 0.25
CTDSP1-210ENST00000491064 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
CTDSP1-210ENST00000491064 TLR7Q9NYK1 1049 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-210ENST00000491064 PARP14Q460N5 1801 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 EPHB4P54760 987 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 GABPAQ06546 454 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 RNPC3Q96LT9 517 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 TANGO6Q9C0B7 1094 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 PHF24Q9UPV7 400 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
CTDSP1-210ENST00000491064 MYO9BQ13459 2157 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 ABRAQ8N0Z2 381 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 MB21D1Q8N884 522 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 CCDC8Q9H0W5 538 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 MROH8Q9H579 483 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 MYH8P13535 1937 aa16.6■□□□□ 0.25
CTDSP1-210ENST00000491064 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 CLTBP09497 229 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 DSG3P32926 999 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 EVX2Q03828 476 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 KIAA1755Q5JYT7 1200 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 EAF2Q96CJ1 260 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-210ENST00000491064 MPHOSPH10O00566 681 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 KIAA0355O15063 1070 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 BCAR3O75815 825 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 MAP3K12Q12852 859 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 PLS1Q14651 629 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 GRIN2CQ14957 1233 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 NCOR1O75376 2440 aa16.58■□□□□ 0.24
CTDSP1-210ENST00000491064 RARBP10826 455 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 FCER1AP12319 257 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 RAG1P15918 1043 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 TJAP1Q5JTD0 557 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 RNF180Q86T96 592 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 ATG4CQ96DT6 458 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
CTDSP1-210ENST00000491064 ROBO3Q96MS0 1386 aa16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 PQBP1O60828 265 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 FLOT1O75955 427 aa16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 PGK1P00558 417 aa16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 DNAJB2P25686 324 aa16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 FPGSQ05932 587 aa16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 MCM9Q9NXL9 1143 aa16.56■□□□□ 0.24
CTDSP1-210ENST00000491064 MAGEB6P1A0A0J9YX57 407 aa16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 A0A1W2PQ45 241 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 A0A1W2PQY0 241 aa16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 TMEM39AQ9NV64 488 aa16.55■□□□□ 0.24
CTDSP1-210ENST00000491064 TNFRSF10AO00220 468 aa16.54■□□□□ 0.24
CTDSP1-210ENST00000491064 SLC25A27O95847 323 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms