RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 ME1P48163 572 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 MYSM1Q5VVJ2 828 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 STAG2Q8N3U4 1231 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 CEP95Q96GE4 821 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 TMEM47Q9BQJ4 181 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 MYH6P13533 1939 aa11.63□□□□□ -0.55
HDAC9-225ENST00000490851 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 MPHOSPH10O00566 681 aaKnown RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 HLA-DOAP06340 250 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 AKR1B1P15121 316 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 TGFB2P61812 414 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 L1TD1Q5T7N2 865 aaKnown RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 BRAPQ7Z569 592 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 DGKHQ86XP1 1220 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 NIM1KQ8IY84 436 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 PANK2Q9BZ23 570 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 GRPEL1Q9HAV7 217 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 SERPINB13Q9UIV8 391 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 SERPINA10Q9UK55 444 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 CLRN2A0PK11 232 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 ZNF445P59923 1031 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 FUT2Q10981 343 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 STK38Q15208 465 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 SAFBQ15424 915 aaKnown RBP eCLIP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 SF3A1Q15459 793 aaKnown RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 CAMK4Q16566 473 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 CCDC183Q5T5S1 534 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 RSBN1LQ6PCB5 846 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 TSHZ1Q6ZSZ6 1077 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 DIS3L2Q8IYB7 885 aaKnown RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 RNF26Q9BY78 433 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 CPVLQ9H3G5 476 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 FAM198AQ9UFP1 575 aa11.62□□□□□ -0.55
HDAC9-225ENST00000490851 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-225ENST00000490851 KIF13BQ9NQT8 1826 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-225ENST00000490851 MMP1P03956 469 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 XRCC6P12956 609 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC9-225ENST00000490851 NR5A1Q13285 461 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 PPP2R5BQ15173 497 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 PKN1Q16512 942 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 NEDD1Q8NHV4 660 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 OXER1Q8TDS5 423 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC9-225ENST00000490851 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 ATP2B1P20020 1258 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 KIF5BP33176 963 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 GABPAQ06546 454 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 LRRC47Q8N1G4 583 aaKnown RBP11.61□□□□□ -0.55
HDAC9-225ENST00000490851 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC9-225ENST00000490851 DACT1Q9NYF0 836 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
HDAC9-225ENST00000490851 TCP10L2B9ZVM9 353 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
HDAC9-225ENST00000490851 VEGFAP15692 232 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-225ENST00000490851 SHMT1P34896 483 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-225ENST00000490851 CCDC178Q5BJE1 867 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 LRSAM1Q6UWE0 723 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 TAOK3Q9H2K8 898 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 MYH8P13535 1937 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 RAD21O60216 631 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 NR1I2O75469 434 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 MARCKSP29966 332 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-225ENST00000490851 MRE11P49959 708 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 HDLBPQ00341 1268 aaKnown RBP11.6□□□□□ -0.55
HDAC9-225ENST00000490851 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 NOSTRINQ8IVI9 506 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 OGFOD1Q8N543 542 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 RNF214Q8ND24 703 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
HDAC9-225ENST00000490851 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 MAD2L2Q9UI95 211 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 ZNRF3Q9ULT6 936 aa11.6□□□□□ -0.55
HDAC9-225ENST00000490851 XBP1P17861 261 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 RASSF7Q02833 373 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 GRM4Q14833 912 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 CCAR1Q8IX12 1150 aaKnown RBP11.59□□□□□ -0.55
HDAC9-225ENST00000490851 LINC00301Q8NCQ3 95 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 NLGN2Q8NFZ4 835 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 ANKS1AQ92625 1134 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 DNAJC18Q9H819 358 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 ISY1Q9ULR0 285 aaKnown RBP11.59□□□□□ -0.55
HDAC9-225ENST00000490851 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
HDAC9-225ENST00000490851 SHTN1A0MZ66 631 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 VIL1P09327 827 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms