RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 CREG2Q8IUH2 290 aa8.52□□□□□ -1.05
LRRC1-204ENST00000490222 CCDC120Q96HB5 630 aa8.52□□□□□ -1.05
LRRC1-204ENST00000490222 ALPK1Q96QP1 1244 aa8.52□□□□□ -1.05
LRRC1-204ENST00000490222 CNNM2Q9H8M5 875 aa8.52□□□□□ -1.05
LRRC1-204ENST00000490222 SCAMP3O14828 347 aaKnown RBP8.51□□□□□ -1.05
LRRC1-204ENST00000490222 MCM4P33991 863 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 GDNFP39905 211 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 AFMP43652 599 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 OGFOD2Q6N063 350 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 ZSWIM9Q86XI8 627 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 RNF34Q969K3 372 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 ATG4CQ96DT6 458 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 SLAMF8Q9P0V8 285 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 PCDHGB7Q9Y5F8 929 aa8.51□□□□□ -1.05
LRRC1-204ENST00000490222 MEIS3P2A8K0S8 358 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 CHMP4BP1P59074 171 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 RNF4P78317 190 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 LRRFIP1Q32MZ4 808 aaKnown RBP8.5□□□□□ -1.05
LRRC1-204ENST00000490222 NLRC3Q7RTR2 1065 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 POU5F2Q8N7G0 328 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 TMEM40Q8WWA1 233 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.5□□□□□ -1.05
LRRC1-204ENST00000490222 DUSP13Q9UII6 198 aa8.5□□□□□ -1.05
LRRC1-204ENST00000490222 POLR2BP30876 1174 aaKnown RBP8.49□□□□□ -1.05
LRRC1-204ENST00000490222 ANTXR1Q9H6X2 564 aa8.49□□□□□ -1.05
LRRC1-204ENST00000490222 DDX41Q9UJV9 622 aaKnown RBP8.49□□□□□ -1.05
LRRC1-204ENST00000490222 DNAJC25-GNG10A0A024R161 153 aa8.48□□□□□ -1.05
LRRC1-204ENST00000490222 CCNFP41002 786 aa8.48□□□□□ -1.05
LRRC1-204ENST00000490222 RAD51AP2Q09MP3 1159 aa8.48□□□□□ -1.05
LRRC1-204ENST00000490222 FYB2Q5VWT5 728 aa8.48□□□□□ -1.05
LRRC1-204ENST00000490222 NME1P15531 152 aaKnown RBP8.47□□□□□ -1.05
LRRC1-204ENST00000490222 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
LRRC1-204ENST00000490222 EGR3Q06889 387 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 KCNMB1Q16558 191 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 RALGPS1Q5JS13 557 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 TTC6Q86TZ1 520 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 METTL16Q86W50 562 aaKnown RBP8.47□□□□□ -1.05
LRRC1-204ENST00000490222 TMEM59LQ9UK28 342 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 ZNRF3Q9ULT6 936 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 PCDHA11Q9Y5I1 949 aa8.47□□□□□ -1.05
LRRC1-204ENST00000490222 SHISA3A0PJX4 238 aa8.46□□□□□ -1.06
LRRC1-204ENST00000490222 LTKP29376 864 aa8.46□□□□□ -1.06
LRRC1-204ENST00000490222 NBPF12Q5TAG4 269 aaPredicted RBP8.46□□□□□ -1.06
LRRC1-204ENST00000490222 KIRREL1Q96J84 757 aa8.46□□□□□ -1.06
LRRC1-204ENST00000490222 ADAMTS10Q9H324 1103 aa8.46□□□□□ -1.06
LRRC1-204ENST00000490222 ZNF503-AS2A6NEH8 195 aa8.45□□□□□ -1.06
LRRC1-204ENST00000490222 TNFRSF10CO14798 259 aa8.45□□□□□ -1.06
LRRC1-204ENST00000490222 CLEC3AO75596 197 aa8.45□□□□□ -1.06
LRRC1-204ENST00000490222 IMPDH2P12268 514 aa8.45□□□□□ -1.06
LRRC1-204ENST00000490222 NMIQ13287 307 aaPredicted RBP8.45□□□□□ -1.06
LRRC1-204ENST00000490222 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
LRRC1-204ENST00000490222 ENOX1Q8TC92 643 aaKnown RBP8.45□□□□□ -1.06
LRRC1-204ENST00000490222 MRRFQ96E11 262 aaKnown RBP8.45□□□□□ -1.06
LRRC1-204ENST00000490222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.44□□□□□ -1.06
LRRC1-204ENST00000490222 GLI1P08151 1106 aa8.44□□□□□ -1.06
LRRC1-204ENST00000490222 CLEC16AQ2KHT3 1053 aa8.44□□□□□ -1.06
LRRC1-204ENST00000490222 NBPF9Q3BBW0 867 aa8.44□□□□□ -1.06
LRRC1-204ENST00000490222 ZNF654Q8IZM8 581 aa8.44□□□□□ -1.06
LRRC1-204ENST00000490222 ASCC2Q9H1I8 757 aaPredicted RBP8.44□□□□□ -1.06
LRRC1-204ENST00000490222 KIAA1522Q9P206 1035 aaPredicted RBP8.44□□□□□ -1.06
LRRC1-204ENST00000490222 RAC2P15153 192 aa8.43□□□□□ -1.06
LRRC1-204ENST00000490222 HK2P52789 917 aa8.43□□□□□ -1.06
LRRC1-204ENST00000490222 TMEM67Q5HYA8 995 aa8.43□□□□□ -1.06
LRRC1-204ENST00000490222 SYTL5Q8TDW5 730 aaPredicted RBP8.43□□□□□ -1.06
LRRC1-204ENST00000490222 SLC9A7Q96T83 725 aa8.43□□□□□ -1.06
LRRC1-204ENST00000490222 HDAC8Q9BY41 377 aa8.43□□□□□ -1.06
LRRC1-204ENST00000490222 FAM53CQ9NYF3 392 aa8.43□□□□□ -1.06
LRRC1-204ENST00000490222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.43□□□□□ -1.06
LRRC1-204ENST00000490222 UNCXA6NJT0 531 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 HPXP02790 462 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 ZGLP1P0C6A0 271 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 HDLBPQ00341 1268 aaKnown RBP8.42□□□□□ -1.06
LRRC1-204ENST00000490222 TEKQ02763 1124 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 INTS3Q68E01 1043 aaKnown RBP8.42□□□□□ -1.06
LRRC1-204ENST00000490222 TMEM192Q8IY95 271 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 DAGLBQ8NCG7 672 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 LIN37Q96GY3 246 aaPredicted RBP8.42□□□□□ -1.06
LRRC1-204ENST00000490222 FERD3LQ96RJ6 166 aa8.42□□□□□ -1.06
LRRC1-204ENST00000490222 ACRP10323 421 aa8.41□□□□□ -1.06
LRRC1-204ENST00000490222 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
LRRC1-204ENST00000490222 ERVFC1P60507 584 aa8.41□□□□□ -1.06
LRRC1-204ENST00000490222 PAK2Q13177 524 aa8.41□□□□□ -1.06
LRRC1-204ENST00000490222 TMC3Q7Z5M5 1100 aa8.41□□□□□ -1.06
LRRC1-204ENST00000490222 TAB3Q8N5C8 712 aaPredicted RBP8.41□□□□□ -1.06
LRRC1-204ENST00000490222 ZNF512BQ96KM6 892 aaPredicted RBP8.41□□□□□ -1.06
LRRC1-204ENST00000490222 SLC6A18Q96N87 628 aa8.41□□□□□ -1.06
LRRC1-204ENST00000490222 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
LRRC1-204ENST00000490222 COL9A2Q14055 689 aaPredicted RBP8.4□□□□□ -1.06
LRRC1-204ENST00000490222 ZNF648Q5T619 568 aaPredicted RBP8.4□□□□□ -1.06
LRRC1-204ENST00000490222 LCE3BQ5TA77 95 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 RNF111Q6ZNA4 994 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 NT5DC4Q86YG4 428 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.06
LRRC1-204ENST00000490222 RBBP8NLQ8NC74 664 aaPredicted RBP8.4□□□□□ -1.06
LRRC1-204ENST00000490222 PDZD8Q8NEN9 1154 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 ABHD4Q8TB40 342 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 MYLIPQ8WY64 445 aa8.4□□□□□ -1.06
LRRC1-204ENST00000490222 DHX38Q92620 1227 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms