RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
GABBR1-217ENST00000489839 SWAP70Q9UH65 585 aa13.31□□□□□ -0.28
GABBR1-217ENST00000489839 FRMPD3Q5JV73 1810 aa13.31□□□□□ -0.28
GABBR1-217ENST00000489839 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
GABBR1-217ENST00000489839 XRCC5P13010 732 aaKnown RBP13.3□□□□□ -0.28
GABBR1-217ENST00000489839 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
GABBR1-217ENST00000489839 CCND3P30281 292 aaPredicted RBP13.3□□□□□ -0.28
GABBR1-217ENST00000489839 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
GABBR1-217ENST00000489839 NPLOC4Q8TAT6 608 aa13.3□□□□□ -0.28
GABBR1-217ENST00000489839 GTF3C2Q8WUA4 911 aaPredicted RBP13.3□□□□□ -0.28
GABBR1-217ENST00000489839 SEC62Q99442 399 aaKnown RBP13.3□□□□□ -0.28
GABBR1-217ENST00000489839 RNF113AO15541 343 aaKnown RBP13.29□□□□□ -0.28
GABBR1-217ENST00000489839 ICA1Q05084 483 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 MOV10L1Q9BXT6 1211 aaKnown RBP13.29□□□□□ -0.28
GABBR1-217ENST00000489839 HMX1Q9NP08 348 aaPredicted RBP13.29□□□□□ -0.28
GABBR1-217ENST00000489839 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 SMCHD1A6NHR9 2005 aa13.29□□□□□ -0.28
GABBR1-217ENST00000489839 GPAA1O43292 621 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
GABBR1-217ENST00000489839 RASA1P20936 1047 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 PTPREP23469 700 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 DSG3P32926 999 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 RGS2P41220 211 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
GABBR1-217ENST00000489839 COG2Q14746 738 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 WDR78Q5VTH9 848 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 APPBP2Q92624 585 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 ATG4CQ96DT6 458 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 APBA2Q99767 749 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 VCPKMTQ9H867 229 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 MYH4Q9Y623 1939 aa13.28□□□□□ -0.28
GABBR1-217ENST00000489839 SLC15A5A6NIM6 579 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 IGHA2P01877 340 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.29
GABBR1-217ENST00000489839 GRB14Q14449 540 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 SBK1Q52WX2 424 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 LHX8Q68G74 356 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 CCAR1Q8IX12 1150 aaKnown RBP13.27□□□□□ -0.29
GABBR1-217ENST00000489839 TRPV1Q8NER1 839 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
GABBR1-217ENST00000489839 HTATIP2Q9BUP3 242 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 OGDHLQ9ULD0 1010 aa13.27□□□□□ -0.29
GABBR1-217ENST00000489839 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 PFASO15067 1338 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 FOXP2O15409 715 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 COBLO75128 1261 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 FLOT1O75955 427 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 CCNA1P78396 465 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 TTC41PQ6P2S7 1318 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
GABBR1-217ENST00000489839 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 ARHGEF10LQ9HCE6 1279 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 HOXC10Q9NYD6 342 aa13.26□□□□□ -0.29
GABBR1-217ENST00000489839 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
GABBR1-217ENST00000489839 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
GABBR1-217ENST00000489839 RANBP2P49792 3224 aaKnown RBP13.26□□□□□ -0.29
GABBR1-217ENST00000489839 ZNF236Q9UL36 1845 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 ROBO3Q96MS0 1386 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 PRDM1O75626 825 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 HOXC6P09630 235 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 ERCC3P19447 782 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 CYP2C19P33261 490 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 TMEM132BQ14DG7 1078 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 LPAR1Q92633 364 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
GABBR1-217ENST00000489839 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
GABBR1-217ENST00000489839 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
GABBR1-217ENST00000489839 IGKV6D-41A0A0C4DH26 115 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
GABBR1-217ENST00000489839 MX1P20591 662 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 ADORA2AP29274 412 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 ZMYM1Q5SVZ6 1142 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 CCDC129Q6ZRS4 1044 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
GABBR1-217ENST00000489839 IFNL3Q8IZI9 196 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
GABBR1-217ENST00000489839 PATL2C9JE40 543 aaKnown RBP13.23□□□□□ -0.29
GABBR1-217ENST00000489839 EVI5O60447 810 aa13.23□□□□□ -0.29
GABBR1-217ENST00000489839 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms