RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	CLEC10A	Q8IUN9	316 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	RAET1E	Q8TD07	263 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	COA7	Q96BR5	231 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	VCPKMT	Q9H867	229 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	MORF4L1	Q9UBU8	362 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	ATAD5	Q96QE3	1844 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	HSPD1	P10809	573 aa	Known RBP	13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	PRKCZ	Q05513	592 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	SPICE1	Q8N0Z3	855 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	ARMC5	Q96C12	935 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	TANGO6	Q9C0B7	1094 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	GOPC	Q9HD26	462 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	RBPJL	Q9UBG7	517 aa		13.18	□□□□□ -0.3
GGA1-222	ENST00000489772	LOC285556	D6RIA3	1793 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	HTT	P42858	3142 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	PITPNM1	O00562	1244 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	FGA	P02671	866 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	TSPY3	P0CV98	308 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	TSPY8	P0CW00	308 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	GSPT1	P15170	499 aa	Known RBP	13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	SOX10	P56693	466 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	COG2	Q14746	738 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	CCAR1	Q8IX12	1150 aa	Known RBP	13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	PAGR1	Q9BTK6	254 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	TXNRD2	Q9NNW7	524 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	HOXC10	Q9NYD6	342 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	ANAPC4	Q9UJX5	808 aa		13.17	□□□□□ -0.3
GGA1-222	ENST00000489772	ZMYM6	O95789	1325 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	WDR46	O15213	610 aa	Known RBP	13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	RAD21	O60216	631 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	ERVK-9	P63128	1117 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	ERVK-24	P63145	666 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	TFAP4	Q01664	338 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	CTDSPL2	Q05D32	466 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	PPP4R3B	Q5MIZ7	849 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	LBX2	Q6XYB7	198 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	NEDD1	Q8NHV4	660 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	NYAP2	Q9P242	653 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	RABGAP1	Q9Y3P9	1069 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	PTPRF	P10586	1907 aa		13.16	□□□□□ -0.3
GGA1-222	ENST00000489772	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	IGKV6D-41	A0A0C4DH26	115 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	FLOT1	O75955	427 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	TTLL1	O95922	423 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	MAPK4	P31152	587 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	FLT3LG	P49771	235 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	FXR2	P51116	673 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	CCNA1	P78396	465 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	FAM47A	Q5JRC9	791 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	KIAA1755	Q5JYT7	1200 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	SLAIN1	Q8ND83	568 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	SH3TC2	Q8TF17	1288 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	CEP95	Q96GE4	821 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	ZNF333	Q96JL9	665 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	MTMR4	Q9NYA4	1195 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	CLIP2	Q9UDT6	1046 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	GABRQ	Q9UN88	632 aa		13.15	□□□□□ -0.3
GGA1-222	ENST00000489772	TSPY2	A6NKD2	308 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	HAX1	O00165	279 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	PEX10	O60683	326 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	NEFL	P07196	543 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	GRK4	P32298	578 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	RGS19	P49795	217 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	IRF5	Q13568	498 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772		Q3C1V9	767 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	MKL1	Q969V6	931 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	CWC22	Q9HCG8	908 aa	Known RBP	13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	SYNPO2	Q9UMS6	1093 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
GGA1-222	ENST00000489772	PLIN4	Q96Q06	1357 aa		13.14	□□□□□ -0.31
GGA1-222	ENST00000489772		F5H6K3	240 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	ORC4	O43929	436 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	ADCY3	O60266	1144 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	RANBP6	O60518	1105 aa	Known RBP	13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	CNMD	O75829	334 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	FGR	P09769	529 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	KLRC3	Q07444	240 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	POTEE	Q6S8J3	1075 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	MB21D1	Q8N884	522 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	RUFY2	Q8WXA3	655 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	TMEM106C	Q9BVX2	250 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	INCENP	Q9NQS7	918 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	TOMM22	Q9NS69	142 aa		13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	BIN2	Q9UBW5	565 aa	Predicted RBP	13.13	□□□□□ -0.31
GGA1-222	ENST00000489772	ZNF213	O14771	459 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	NDUFB10	O96000	172 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	MYC	P01106	439 aa	Predicted RBP	13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	PC	P11498	1178 aa	Known RBP	13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	HAND2	P61296	217 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	UBXN2A	P68543	259 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	RRP12	Q5JTH9	1297 aa	Known RBP	13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	FAM83B	Q5T0W9	1011 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	MFSD6	Q6ZSS7	791 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	PXYLP1	Q8TE99	480 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	SOCS4	Q8WXH5	440 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	CCDC136	Q96JN2	1154 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms