RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 U2AF1L4Q8WU68 220 aaKnown RBP29.08■■■□□ 2.25
COPS9-203ENST00000489698 HMGCRP04035 888 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 GNAT2P19087 354 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 CCNA1P78396 465 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 SBK1Q52WX2 424 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 WDR78Q5VTH9 848 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 GPR142Q7Z601 462 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 PLEKHH3Q7Z736 793 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 SOCS4Q8WXH5 440 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 DEFB118Q96PH6 123 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 SEC62Q99442 399 aaKnown RBP29.07■■■□□ 2.24
COPS9-203ENST00000489698 SH2D4AQ9H788 454 aa29.07■■■□□ 2.24
COPS9-203ENST00000489698 SPDYE16A6NNV3 312 aaPredicted RBP29.06■■■□□ 2.24
COPS9-203ENST00000489698 SGPL1O95470 568 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 KIAA1755Q5JYT7 1200 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 SPICE1Q8N0Z3 855 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 MKNK2Q9HBH9 465 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 BTBD7Q9P203 1132 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 TMX2Q9Y320 296 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 SZT2Q5T011 3432 aa29.06■■■□□ 2.24
COPS9-203ENST00000489698 SALL3Q9BXA9 1300 aa29.05■■■□□ 2.24
COPS9-203ENST00000489698 TFRCP02786 760 aaKnown RBP29.05■■■□□ 2.24
COPS9-203ENST00000489698 TRIM32Q13049 653 aa29.05■■■□□ 2.24
COPS9-203ENST00000489698 COG2Q14746 738 aa29.05■■■□□ 2.24
COPS9-203ENST00000489698 EPB41L4AQ9HCS5 686 aaPredicted RBP29.05■■■□□ 2.24
COPS9-203ENST00000489698 PATL2C9JE40 543 aaKnown RBP29.04■■■□□ 2.24
COPS9-203ENST00000489698 EEF2P13639 858 aaKnown RBP29.04■■■□□ 2.24
COPS9-203ENST00000489698 SAMD1Q6SPF0 538 aaPredicted RBP29.04■■■□□ 2.24
COPS9-203ENST00000489698 LBX2Q6XYB7 198 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 TRIB2Q92519 343 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 LPAR1Q92633 364 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 HTATIP2Q9BUP3 242 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 VCPKMTQ9H867 229 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 KANSL2Q9H9L4 492 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 HOXC10Q9NYD6 342 aa29.04■■■□□ 2.24
COPS9-203ENST00000489698 RBM27Q9P2N5 1060 aaKnown RBP29.04■■■□□ 2.24
COPS9-203ENST00000489698 AAMPQ13685 434 aa29.03■■■□□ 2.24
COPS9-203ENST00000489698 UBE2Q1Q7Z7E8 422 aa29.03■■■□□ 2.24
COPS9-203ENST00000489698 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.03■■■□□ 2.246e-9■■■■■ 50.5
COPS9-203ENST00000489698 RANBP2P49792 3224 aaKnown RBP29.02■■■□□ 2.24
COPS9-203ENST00000489698 RAD21O60216 631 aa29.02■■■□□ 2.24
COPS9-203ENST00000489698 RGS2P41220 211 aa29.02■■■□□ 2.24
COPS9-203ENST00000489698 ZMYM1Q5SVZ6 1142 aa29.02■■■□□ 2.24
COPS9-203ENST00000489698 IFNL3Q8IZI9 196 aa29.02■■■□□ 2.24
COPS9-203ENST00000489698 NACAP1Q9BZK3 213 aa29.02■■■□□ 2.24
COPS9-203ENST00000489698 PAK6Q9NQU5 681 aaPredicted RBP29.02■■■□□ 2.24
COPS9-203ENST00000489698 FLOT1O75955 427 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 XRCC5P13010 732 aaKnown RBP29.01■■■□□ 2.23
COPS9-203ENST00000489698 RASA1P20936 1047 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 PDE1AP54750 535 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 MORN1Q5T089 497 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 B4GALNT3Q6L9W6 998 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 EXOC6Q8TAG9 804 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 LNPKQ9C0E8 428 aa29.01■■■□□ 2.23
COPS9-203ENST00000489698 RWDD1Q9H446 243 aaPredicted RBP29.01■■■□□ 2.23
COPS9-203ENST00000489698 HMX1Q9NP08 348 aaPredicted RBP29.01■■■□□ 2.23
COPS9-203ENST00000489698 FARP2O94887 1054 aaPredicted RBP29■■■□□ 2.23
COPS9-203ENST00000489698 ZKSCAN1P17029 563 aaPredicted RBP29■■■□□ 2.23
COPS9-203ENST00000489698 USP6NLQ92738 828 aa29■■■□□ 2.23
COPS9-203ENST00000489698 STAP2Q9UGK3 403 aa29■■■□□ 2.23
COPS9-203ENST00000489698 RPTORQ8N122 1335 aa28.99■■■□□ 2.23
COPS9-203ENST00000489698 DSG3P32926 999 aa28.99■■■□□ 2.23
COPS9-203ENST00000489698 EVI5LQ96CN4 794 aa28.99■■■□□ 2.23
COPS9-203ENST00000489698 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.99■■■□□ 2.23
COPS9-203ENST00000489698 GOPCQ9HD26 462 aa28.99■■■□□ 2.23
COPS9-203ENST00000489698 IVNS1ABPQ9Y6Y0 642 aa28.99■■■□□ 2.23
COPS9-203ENST00000489698 ROBO3Q96MS0 1386 aa28.99■■■□□ 2.23
COPS9-203ENST00000489698 WDR46O15213 610 aaKnown RBP28.98■■■□□ 2.23
COPS9-203ENST00000489698 PRDM1O75626 825 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 MAP2K5Q13163 448 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 CCL14Q16627 93 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 CCDC129Q6ZRS4 1044 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 TRMT44Q8IYL2 757 aaKnown RBP28.98■■■□□ 2.23
COPS9-203ENST00000489698 ZNF444Q8N0Y2 327 aaPredicted RBP28.98■■■□□ 2.23
COPS9-203ENST00000489698 NAPBQ9H115 298 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 ZNF287Q9HBT7 754 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 RLFQ13129 1914 aa28.98■■■□□ 2.23
COPS9-203ENST00000489698 PRKAR2AP13861 404 aaKnown RBP28.97■■■□□ 2.23
COPS9-203ENST00000489698 PTPREP23469 700 aa28.97■■■□□ 2.23
COPS9-203ENST00000489698 PLS1Q14651 629 aa28.97■■■□□ 2.23
COPS9-203ENST00000489698 ATG4CQ96DT6 458 aa28.97■■■□□ 2.23
COPS9-203ENST00000489698 APBA2Q99767 749 aa28.97■■■□□ 2.23
COPS9-203ENST00000489698 NR2E3Q9Y5X4 410 aa28.97■■■□□ 2.23
COPS9-203ENST00000489698 SLC15A5A6NIM6 579 aa28.96■■■□□ 2.23
COPS9-203ENST00000489698 MOV10L1Q9BXT6 1211 aaKnown RBP28.96■■■□□ 2.23
COPS9-203ENST00000489698 SPATC1LQ9H0A9 340 aa28.96■■■□□ 2.23
COPS9-203ENST00000489698 MB21D1Q8N884 522 aa28.95■■■□□ 2.22
COPS9-203ENST00000489698 CRISPLD2Q9H0B8 497 aa28.95■■■□□ 2.22
COPS9-203ENST00000489698 SUPT16HQ9Y5B9 1047 aaKnown RBP28.95■■■□□ 2.22
COPS9-203ENST00000489698 IGHDP01880 384 aa28.94■■■□□ 2.22
COPS9-203ENST00000489698 SLC3A2P08195 630 aaKnown RBP28.94■■■□□ 2.22
COPS9-203ENST00000489698 CAPN2P17655 700 aa28.94■■■□□ 2.22
COPS9-203ENST00000489698 SMC5Q8IY18 1101 aa28.94■■■□□ 2.22
COPS9-203ENST00000489698 FBXO28Q9NVF7 368 aa28.94■■■□□ 2.22
COPS9-203ENST00000489698 GREB1LQ9C091 1923 aaPredicted RBP28.94■■■□□ 2.22
COPS9-203ENST00000489698 CACNB2Q08289 660 aaPredicted RBP28.93■■■□□ 2.22
COPS9-203ENST00000489698 FAM83BQ5T0W9 1011 aa28.93■■■□□ 2.22
COPS9-203ENST00000489698 MAP3K21Q5TCX8 1036 aa28.93■■■□□ 2.22
COPS9-203ENST00000489698 PRO3102Q9H379 93 aa28.93■■■□□ 2.22
COPS9-203ENST00000489698 CLIP2Q9UDT6 1046 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms