RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
COL9A1-208ENST00000489611 GALNT17Q6IS24 598 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-208ENST00000489611 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 PDCL3Q9H2J4 239 aa17.09■□□□□ 0.33
COL9A1-208ENST00000489611 POLR2DO15514 142 aaKnown RBP17.08■□□□□ 0.33
COL9A1-208ENST00000489611 FILIP1Q7Z7B0 1213 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 SPATA20Q8TB22 786 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 TBC1D22AQ8WUA7 517 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 TNFRSF25Q93038 417 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 XPO4Q9C0E2 1151 aaKnown RBP17.08■□□□□ 0.33
COL9A1-208ENST00000489611 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 IFNKQ9P0W0 207 aa17.08■□□□□ 0.33
COL9A1-208ENST00000489611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
COL9A1-208ENST00000489611 IL1R1P14778 569 aa17.08■□□□□ 0.32
COL9A1-208ENST00000489611 PDE6BP35913 854 aa17.08■□□□□ 0.32
COL9A1-208ENST00000489611 GPSM2P81274 684 aa17.08■□□□□ 0.32
COL9A1-208ENST00000489611 FANCCQ00597 558 aa17.08■□□□□ 0.32
COL9A1-208ENST00000489611 FBXW7Q969H0 707 aa17.08■□□□□ 0.32
COL9A1-208ENST00000489611 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
COL9A1-208ENST00000489611 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
COL9A1-208ENST00000489611 CCP110O43303 1012 aa17.07■□□□□ 0.32
COL9A1-208ENST00000489611 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
COL9A1-208ENST00000489611 CCDC112Q8NEF3 446 aa17.07■□□□□ 0.32
COL9A1-208ENST00000489611 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
COL9A1-208ENST00000489611 MKNK2Q9HBH9 465 aa17.07■□□□□ 0.32
COL9A1-208ENST00000489611 A0A087WWV3 80 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 SLFN14P0C7P3 912 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 NPR1P16066 1061 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 SFPQP23246 707 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 TPD52L1Q16890 204 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 TTC38Q5R3I4 469 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 ARL6IP4Q66PJ3 421 aaKnown RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 ZNF444Q8N0Y2 327 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 ENOX1Q8TC92 643 aaKnown RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 CSRNP2Q9H175 543 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 GGA1Q9UJY5 639 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 ACTN4O43707 911 aaKnown RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 SERPINC1P01008 464 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 NLRP5P59047 1200 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 CCZ1BP86790 482 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 CCZ1P86791 482 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 ATP2C1P98194 919 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-208ENST00000489611 TFAP4Q01664 338 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 MORC3Q14149 939 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
COL9A1-208ENST00000489611 QSER1Q2KHR3 1735 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 SMIM22K7EJ46 135 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
COL9A1-208ENST00000489611 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
COL9A1-208ENST00000489611 UBASH3AP57075 661 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 GRM4Q14833 912 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 NPY5RQ15761 445 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 C2CD5Q86YS7 1000 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
COL9A1-208ENST00000489611 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL9A1-208ENST00000489611 GSDMAQ96QA5 445 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 SERTAD1Q9UHV2 236 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 MAN1B1Q9UKM7 699 aa17.05■□□□□ 0.32
COL9A1-208ENST00000489611 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 USP17L8P0C7I0 530 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 TNNT1P13805 278 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
COL9A1-208ENST00000489611 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 HSD3B7Q9H2F3 369 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
COL9A1-208ENST00000489611 CYP2D6P10635 497 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 CHRNA5P30532 468 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 SYCP1Q15431 976 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 TMC6Q7Z403 805 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 DAGLBQ8NCG7 672 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL9A1-208ENST00000489611 SHISA4Q96DD7 197 aa17.04■□□□□ 0.32
COL9A1-208ENST00000489611 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
COL9A1-208ENST00000489611 UFL1O94874 794 aa17.03■□□□□ 0.32
COL9A1-208ENST00000489611 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
COL9A1-208ENST00000489611 RTFDC1Q9BY42 306 aaPredicted RBP17.03■□□□□ 0.32
COL9A1-208ENST00000489611 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
COL9A1-208ENST00000489611 NMT2O60551 498 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 ATP2B1P20020 1258 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 ALDH1B1P30837 517 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 GRIN1Q05586 938 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 CFAP100Q494V2 611 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms