RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 PCDH10Q9P2E7 1040 aa16.12■□□□□ 0.17
LMO4-203ENST00000489303 SGPL1O95470 568 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 HERVK_113P62684 666 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 ICA1Q05084 483 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
LMO4-203ENST00000489303 KANSL2Q9H9L4 492 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 HELLSQ9NRZ9 838 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 GJD2Q9UKL4 321 aa16.11■□□□□ 0.17
LMO4-203ENST00000489303 CEP290O15078 2479 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 VCAM1P19320 739 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 IRF5Q13568 498 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 ZNF444Q8N0Y2 327 aaPredicted RBP16.1■□□□□ 0.17
LMO4-203ENST00000489303 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 GPRC5AQ8NFJ5 357 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 PXYLP1Q8TE99 480 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
LMO4-203ENST00000489303 EPB41L4AQ9HCS5 686 aaPredicted RBP16.1■□□□□ 0.17
LMO4-203ENST00000489303 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
LMO4-203ENST00000489303 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 PDE4BQ07343 736 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 Q3C1V9 767 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 CATSPERGQ6ZRH7 1159 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 NKX2-3Q8TAU0 364 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 DIS3LQ8TF46 1054 aaKnown RBP16.09■□□□□ 0.17
LMO4-203ENST00000489303 LPAR1Q92633 364 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 RPAP3Q9H6T3 665 aaPredicted RBP16.09■□□□□ 0.17
LMO4-203ENST00000489303 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
LMO4-203ENST00000489303 RBM27Q9P2N5 1060 aaKnown RBP16.09■□□□□ 0.17
LMO4-203ENST00000489303 MORF4L1Q9UBU8 362 aa16.09■□□□□ 0.17
LMO4-203ENST00000489303 SZT2Q5T011 3432 aa16.08■□□□□ 0.16
LMO4-203ENST00000489303 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
LMO4-203ENST00000489303 TFRCP02786 760 aaKnown RBP16.08■□□□□ 0.16
LMO4-203ENST00000489303 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
LMO4-203ENST00000489303 CWC22Q9HCG8 908 aaKnown RBP16.08■□□□□ 0.16
LMO4-203ENST00000489303 RBPJLQ9UBG7 517 aa16.08■□□□□ 0.16
LMO4-203ENST00000489303 TMX2Q9Y320 296 aa16.08■□□□□ 0.16
LMO4-203ENST00000489303 ROBO3Q96MS0 1386 aa16.08■□□□□ 0.16
LMO4-203ENST00000489303 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 A0A1W2PRG0 241 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 HIP1O00291 1037 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 CYP2B6P20813 491 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
LMO4-203ENST00000489303 CCNA1P78396 465 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 CCDC129Q6ZRS4 1044 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 PORCNQ9H237 461 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 GOPCQ9HD26 462 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 HOXC10Q9NYD6 342 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
LMO4-203ENST00000489303 RANBP2P49792 3224 aaKnown RBP16.07■□□□□ 0.16
LMO4-203ENST00000489303 BAZ2AQ9UIF9 1905 aaKnown RBP16.06■□□□□ 0.16
LMO4-203ENST00000489303 EEF2P13639 858 aaKnown RBP16.06■□□□□ 0.16
LMO4-203ENST00000489303 RASA1P20936 1047 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 MAPK4P31152 587 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 ERVK-9P63128 1117 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 ERVK-24P63145 666 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 PPARAQ07869 468 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 COG2Q14746 738 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 TRIB2Q92519 343 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
LMO4-203ENST00000489303 CRISPLD2Q9H0B8 497 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.06■□□□□ 0.164e-6■■■□□ 16.3
LMO4-203ENST00000489303 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 TRIOBPQ9H2D6 2365 aa16.06■□□□□ 0.16
LMO4-203ENST00000489303 RAD21O60216 631 aa16.05■□□□□ 0.16
LMO4-203ENST00000489303 PRDM1O75626 825 aa16.05■□□□□ 0.16
LMO4-203ENST00000489303 SDSP20132 328 aa16.05■□□□□ 0.16
LMO4-203ENST00000489303 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
LMO4-203ENST00000489303 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
LMO4-203ENST00000489303 CLEC10AQ8IUN9 316 aa16.05■□□□□ 0.16
LMO4-203ENST00000489303 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
LMO4-203ENST00000489303 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
LMO4-203ENST00000489303 CNMDO75829 334 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 HMGCRP04035 888 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 CCL14Q16627 93 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 LBX2Q6XYB7 198 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 PRO3102Q9H379 93 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 NYAP2Q9P242 653 aa16.04■□□□□ 0.16
LMO4-203ENST00000489303 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
LMO4-203ENST00000489303 FLOT1O75955 427 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 ALX1Q15699 326 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 SOCS4Q8WXH5 440 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 NUDT12Q9BQG2 462 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
LMO4-203ENST00000489303 VPS53Q5VIR6 699 aa16.02■□□□□ 0.16
LMO4-203ENST00000489303 WDR78Q5VTH9 848 aa16.02■□□□□ 0.16
LMO4-203ENST00000489303 PLEKHH3Q7Z736 793 aa16.02■□□□□ 0.16
LMO4-203ENST00000489303 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms