RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GRIN2CQ14957 1233 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 C1orf53Q5VUE5 145 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 USP38Q8NB14 1042 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 RNPC3Q96LT9 517 aaKnown RBP19.77■□□□□ 0.76
USP48-210ENST00000489108 EHD4Q9H223 541 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 GPR108Q9NPR9 543 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 HOXC10Q9NYD6 342 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 TACC3Q9Y6A5 838 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 ERCC3P19447 782 aa19.76■□□□□ 0.75
USP48-210ENST00000489108 SHMT1P34896 483 aa19.76■□□□□ 0.75
USP48-210ENST00000489108 TJAP1Q5JTD0 557 aa19.76■□□□□ 0.75
USP48-210ENST00000489108 TTC6Q86TZ1 520 aa19.76■□□□□ 0.75
USP48-210ENST00000489108 ARHGAP45Q92619 1136 aa19.76■□□□□ 0.75
USP48-210ENST00000489108 SPATC1LQ9H0A9 340 aa19.76■□□□□ 0.75
USP48-210ENST00000489108 TMEM265A0A087WTH1 108 aa19.75■□□□□ 0.75
USP48-210ENST00000489108 IGSF3O75054 1194 aa19.75■□□□□ 0.75
USP48-210ENST00000489108 PLCD1P51178 756 aa19.75■□□□□ 0.75
USP48-210ENST00000489108 RARSP54136 660 aaKnown RBP19.75■□□□□ 0.75
USP48-210ENST00000489108 SEPT2Q15019 361 aa19.75■□□□□ 0.75
USP48-210ENST00000489108 FAM47AQ5JRC9 791 aa19.75■□□□□ 0.75
USP48-210ENST00000489108 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
USP48-210ENST00000489108 ZNF512BQ96KM6 892 aaPredicted RBP19.75■□□□□ 0.75
USP48-210ENST00000489108 ZNFX1Q9P2E3 1918 aaKnown RBP19.74■□□□□ 0.75
USP48-210ENST00000489108 ZNF236Q9UL36 1845 aa19.74■□□□□ 0.75
USP48-210ENST00000489108 A0A1W2PRG0 241 aa19.74■□□□□ 0.75
USP48-210ENST00000489108 TNFRSF10AO00220 468 aa19.74■□□□□ 0.75
USP48-210ENST00000489108 IDH1O75874 414 aaKnown RBP19.74■□□□□ 0.75
USP48-210ENST00000489108 CLTBP09497 229 aa19.74■□□□□ 0.75
USP48-210ENST00000489108 SLC5A4Q9NY91 659 aa19.74■□□□□ 0.75
USP48-210ENST00000489108 PHF24Q9UPV7 400 aa19.74■□□□□ 0.75
USP48-210ENST00000489108 RAG1P15918 1043 aa19.73■□□□□ 0.75
USP48-210ENST00000489108 MAGEB6Q8N7X4 407 aa19.73■□□□□ 0.75
USP48-210ENST00000489108 MAML3Q96JK9 1138 aa19.73■□□□□ 0.75
USP48-210ENST00000489108 TANGO6Q9C0B7 1094 aa19.73■□□□□ 0.75
USP48-210ENST00000489108 TNNQ9UQP3 1299 aa19.73■□□□□ 0.75
USP48-210ENST00000489108 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.72■□□□□ 0.75
USP48-210ENST00000489108 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.72■□□□□ 0.75
USP48-210ENST00000489108 KIAA0355O15063 1070 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 OS9Q13438 667 aaPredicted RBP19.72■□□□□ 0.75
USP48-210ENST00000489108 PLS1Q14651 629 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 KIAA1755Q5JYT7 1200 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 NCAPG2Q86XI2 1143 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 MROH8Q9H579 483 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 XPNPEP3Q9NQH7 507 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 MUC3AQ02505 3323 aa19.72■□□□□ 0.75
USP48-210ENST00000489108 PQBP1O60828 265 aaKnown RBP19.71■□□□□ 0.75
USP48-210ENST00000489108 PGK1P00558 417 aa19.71■□□□□ 0.75
USP48-210ENST00000489108 DNAJB2P25686 324 aa19.71■□□□□ 0.75
USP48-210ENST00000489108 CERS3Q8IU89 383 aa19.71■□□□□ 0.75
USP48-210ENST00000489108 ABRAQ8N0Z2 381 aa19.71■□□□□ 0.75
USP48-210ENST00000489108 CCDC8Q9H0W5 538 aaPredicted RBP19.71■□□□□ 0.75
USP48-210ENST00000489108 ZNF576Q9H609 170 aa19.71■□□□□ 0.75
USP48-210ENST00000489108 RAPGEFL1Q9UHV5 662 aa19.71■□□□□ 0.75
USP48-210ENST00000489108 DBNLQ9UJU6 430 aaKnown RBP19.71■□□□□ 0.75
USP48-210ENST00000489108 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
USP48-210ENST00000489108 POLR3DP05423 398 aaPredicted RBP19.7■□□□□ 0.74
USP48-210ENST00000489108 RARBP10826 455 aa19.7■□□□□ 0.74
USP48-210ENST00000489108 DSG3P32926 999 aa19.7■□□□□ 0.74
USP48-210ENST00000489108 EVX2Q03828 476 aa19.7■□□□□ 0.74
USP48-210ENST00000489108 FPGSQ05932 587 aa19.7■□□□□ 0.74
USP48-210ENST00000489108 POLA2Q14181 598 aa19.7■□□□□ 0.74
USP48-210ENST00000489108 TMEM39AQ9NV64 488 aa19.7■□□□□ 0.74
USP48-210ENST00000489108 TLR7Q9NYK1 1049 aaKnown RBP19.7■□□□□ 0.74
USP48-210ENST00000489108 SURF6O75683 361 aaKnown RBP19.69■□□□□ 0.74
USP48-210ENST00000489108 FCER1AP12319 257 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 TRIM27P14373 513 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 GABPAQ06546 454 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 RNF180Q86T96 592 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 MB21D1Q8N884 522 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 PPM1EQ8WY54 764 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 ANTXR1Q9H6X2 564 aa19.69■□□□□ 0.74
USP48-210ENST00000489108 A0A1W2PQ45 241 aaPredicted RBP19.68■□□□□ 0.74
USP48-210ENST00000489108 A0A1W2PQY0 241 aa19.68■□□□□ 0.74
USP48-210ENST00000489108 TAL1P17542 331 aaPredicted RBP19.68■□□□□ 0.74
USP48-210ENST00000489108 FAAP100Q0VG06 881 aa19.68■□□□□ 0.74
USP48-210ENST00000489108 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
USP48-210ENST00000489108 CLUAP1Q96AJ1 413 aa19.68■□□□□ 0.74
USP48-210ENST00000489108 ATG4CQ96DT6 458 aa19.68■□□□□ 0.74
USP48-210ENST00000489108 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
USP48-210ENST00000489108 MYO9BQ13459 2157 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 BCAR3O75815 825 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 FLOT1O75955 427 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 ATP8B2P98198 1209 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 SSH3Q8TE77 659 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 TIFAQ96CG3 184 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 EAF2Q96CJ1 260 aaPredicted RBP19.67■□□□□ 0.74
USP48-210ENST00000489108 RIOK1Q9BRS2 568 aaKnown RBP19.67■□□□□ 0.74
USP48-210ENST00000489108 NRBP1Q9UHY1 535 aa19.67■□□□□ 0.74
USP48-210ENST00000489108 IPO8O15397 1037 aaKnown RBP19.66■□□□□ 0.74
USP48-210ENST00000489108 PGK2P07205 417 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 MAP3K12Q12852 859 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 TMEM132BQ14DG7 1078 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 SIAH1Q8IUQ4 282 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 SPICE1Q8N0Z3 855 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 SLC44A5Q8NCS7 719 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.74
USP48-210ENST00000489108 TINF2Q9BSI4 451 aa19.66■□□□□ 0.74
USP48-210ENST00000489108 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
USP48-210ENST00000489108 ZNF865P0CJ78 1059 aaPredicted RBP19.65■□□□□ 0.74
USP48-210ENST00000489108 ANKRD33Q7Z3H0 272 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms