RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
CMSS1-205ENST00000489081 ZNF112Q9UJU3 913 aa13.41□□□□□ -0.26
CMSS1-205ENST00000489081 CDKL5O76039 1030 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 VEGFAP15692 232 aaPredicted RBP13.4□□□□□ -0.26
CMSS1-205ENST00000489081 IFNAR1P17181 557 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 ATP2B2Q01814 1243 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 GRM4Q14833 912 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 RAB3GAP1Q15042 981 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
CMSS1-205ENST00000489081 DDX11Q96FC9 970 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 RRAGCQ9HB90 399 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 GINM1Q9NU53 330 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
CMSS1-205ENST00000489081 CTNND1O60716 968 aaKnown RBP13.39□□□□□ -0.27
CMSS1-205ENST00000489081 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 PLEKHA8P1O95397 391 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 ASNSP08243 561 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 FDPSP14324 419 aaKnown RBP13.39□□□□□ -0.27
CMSS1-205ENST00000489081 KIF5BP33176 963 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 FUT2Q10981 343 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 ORC3Q9UBD5 711 aaPredicted RBP13.39□□□□□ -0.27
CMSS1-205ENST00000489081 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 MYH8P13535 1937 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
CMSS1-205ENST00000489081 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
CMSS1-205ENST00000489081 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
CMSS1-205ENST00000489081 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 PDHBP11177 359 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 SYT1P21579 422 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 INPP5BP32019 993 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 GNAQP50148 359 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 NUCB2P80303 420 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 PKP1Q13835 747 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 PHKBQ93100 1093 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 KLRG1Q96E93 195 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 CDCA5Q96FF9 252 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 WRNIP1Q96S55 665 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
CMSS1-205ENST00000489081 MAD2L2Q9UI95 211 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 KIF3AQ9Y496 699 aa13.38□□□□□ -0.27
CMSS1-205ENST00000489081 A0A1W2PRG0 241 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 USP17L5A8MUK1 530 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 USP2O75604 605 aaPredicted RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 PARP1P09874 1014 aaKnown RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 PDCP20941 246 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 USP17L2Q6R6M4 530 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 SCYL3Q8IZE3 742 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 CMTR1Q8N1G2 835 aaKnown RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 SRBD1Q8N5C6 995 aaKnown RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 GMCL1P1Q8NEA9 526 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 SLC26A6Q9BXS9 759 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 ARHGEF10LQ9HCE6 1279 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.37□□□□□ -0.27
CMSS1-205ENST00000489081 FZD1Q9UP38 647 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
CMSS1-205ENST00000489081 F5H6K3 240 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 STX6O43752 255 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 BRD1O95696 1058 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 KLRC3Q07444 240 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 SLC35G1Q2M3R5 365 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
CMSS1-205ENST00000489081 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
CMSS1-205ENST00000489081 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 CCDC82Q8N4S0 544 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
CMSS1-205ENST00000489081 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
CMSS1-205ENST00000489081 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 ZDHHC9Q9Y397 364 aa13.36□□□□□ -0.27
CMSS1-205ENST00000489081 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 PRPF3O43395 683 aaKnown RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 PPP1R12BO60237 982 aaPredicted RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 NDUFB10O96000 172 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 NF2P35240 595 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 ECE1P42892 770 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 PRKG1Q13976 671 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 MAP1SQ66K74 1059 aaPredicted RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms